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BMC Infect Dis |
2019 |
Zhao MC;Wang L;Qiu FZ;Zhao L;Guo WW;Yang S;Feng ZS;Li GX |
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31622414
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Viral respiratory infections and the oropharyngeal bacterial microbiota in acutely wheezing children. |
PLoS One |
2019 |
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31666401
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Prunin suppresses viral IRES activity and is a potential candidate for treating enterovirus A71 infection. |
Sci Transl Med |
2019 |
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31749410
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The dynamics and interactions of respiratory pathogen carriage among French pilgrims during the 2018 Hajj. |
Emerg Microbes Infect |
2019 |
Hoang VT;Dao TL;Ly TDA;Belhouchat K;Chaht KL;Gaudart J;Mrenda BM;Drali T;Yezli S;Alotaibi B;Fournier PE;Raoult D;Parola P;de Santi VP;Gautret P |
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The Impact of Ambient Environmental Exposures to Microbial Products on Asthma Outcomes from Birth to Childhood. |
Curr Allergy Asthma Rep |
2019 |
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31791902
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Combining Procalcitonin and Rapid Multiplex Respiratory Virus Testing for Antibiotic Stewardship in Older Adult Patients With Severe Acute Respiratory Infection. |
J Am Med Dir Assoc |
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Lee CC;Chang JC;Mao XW;Hsu WT;Chen SY;Chen YC;How CK |
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31923349
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Strengthening timely detection and reporting of unusual respiratory events from health facilities in Yaounde, Cameroon. |
Influenza Other Respir Viruses |
2020 |
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Inactivation by osmotic dehydration and air drying of Salmonella, Shiga toxin-producing Escherichia coli, Listeria monocytogenes, hepatitis A virus and selected surrogates on blueberries. |
Int J Food Microbiol |
2020 |
Bai X;Campagnoli M;Butot S;Putallaz T;Michot L;Zuber S |
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32059033
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Bacterial pneumonia and its associated factors in children from a developing country: A prospective cohort study. |
PLoS One |
2020 |
Nathan AM;Teh CSJ;Jabar KA;Teoh BT;Tangaperumal A;Westerhout C;Zaki R;Eg KP;Thavagnanam S;de Bruyne JA |
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32127629
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High resolution metagenomic characterization of complex infectomes in paediatric acute respiratory infection. |
Sci Rep |
2020 |
Li CX;Li W;Zhou J;Zhang B;Feng Y;Xu CP;Lu YY;Holmes EC;Shi M |
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32132186
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Multicenter Evaluation of the QIAstat-Dx Respiratory Panel for Detection of Viruses and Bacteria in Nasopharyngeal Swab Specimens. |
J Clin Microbiol |
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Leber AL;Lisby JG;Hansen G;Relich RF;Schneider UV;Granato P;Young S;Pareja J;Hannet I |
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Transmission of respiratory tract infections at mass gathering events. |
Curr Opin Pulm Med |
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Petersen E;Memish ZA;Zumla A;Maani AA |
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32163484
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Multicenter evaluation of the QIAstat Respiratory Panel-A new rapid highly multiplexed PCR based assay for diagnosis of acute respiratory tract infections. |
PLoS One |
2020 |
Parcina M;Schneider UV;Visseaux B;Jozic R;Hannet I;Lisby JG |
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Microbial burden and viral exacerbations in a longitudinal multicenter COPD cohort. |
Respir Res |
2020 |
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Community-Based Antibiotic Prescribing Attributable to Respiratory Syncytial Virus and Other Common Respiratory Viruses in Young Children: A Population-Based Time-series Study of Scottish Children. |
Clin Infect Dis |
2021 |
Fitzpatrick T;Malcolm W;McMenamin J;Reynolds A;Guttmann A;Hardelid P |
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32283281
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Pneumonia in children admitted to the national referral hospital in Bhutan: A prospective cohort study. |
Int J Infect Dis |
2020 |
Jullien S;Pradhan D;Tshering T;Sharma R;Dema K;Garcia-Garcia S;Ribo JL;Munoz-Almagro C;Bassat Q |
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CD147 as a Target for COVID-19 Treatment: Suggested Effects of Azithromycin and Stem Cell Engagement. |
Stem Cell Rev Rep |
2020 |
Ulrich H;Pillat MM |
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Evaluation of the BioFire FilmArray Pneumonia Panel for Detection of Viral and Bacterial Pathogens in Lower Respiratory Tract Specimens in the Setting of a Tertiary Care Academic Medical Center. |
J Clin Microbiol |
2020 |
Webber DM;Wallace MA;Burnham CA;Anderson NW |
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Viral Etiology, Clinical Features and Antibiotic Use in Children <5 Years of Age in the Gambia Presenting With Influenza-like Illness. |
Pediatr Infect Dis J |
2020 |
Jarju S;Greenhalgh K;Wathuo M;Banda M;Camara B;Mendy S;Sowe G;Dahaba PO;Jammeh L;Bajinka Y;Sanneh P;Jallow E;Yates A;Lindsey BB;Owens S;Kampmann B;Forrest K;Clarke E;de Silva T |
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Nontypeable Haemophilus influenzae Responds to Virus-Infected Cells with a Significant Increase in Type IV Pilus Expression. |
mSphere |
2020 |
Mokrzan EM;Dairo KA;Novotny LA;Bakaletz LO |
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32462500
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Viruses and atypical bacteria in the respiratory tract of immunocompromised and immunocompetent patients with airway infection. |
Eur J Clin Microbiol Infect Dis |
2020 |
Reckziegel M;Weber-Osel C;Egerer R;Gruhn B;Kubek F;Walther M;Wilhelm S;Zell R;Krumbholz A |
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Freshwater viral metagenome reveals novel and functional phage-borne antibiotic resistance genes. |
Microbiome |
2020 |
Moon K;Jeon JH;Kang I;Park KS;Lee K;Cha CJ;Lee SH;Cho JC |
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32492284
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Impact of respiratory viral polymerase chain reaction testing on de-escalation of antibiotic therapy in children who require chronic positive pressure ventilation. |
Pediatr Pulmonol |
2020 |
Beltran Ale G;Benscoter D;Hossain MM;Zhang Y;Courter J;Thomson J |
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32540869
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Nontypeable Haemophilus influenzae Type IV Pilus Mediates Augmented Adherence to Rhinovirus-Infected Human Airway Epithelial Cells. |
Infect Immun |
2020 |
Toone SL;Ratkiewicz M;Novotny LA;Phong BL;Bakaletz LO |
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32598661
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[Etiology of severe community - acquired pneumonia in adults: results of the first Russian multicenter study]. |
Ter Arkh |
2020 |
Zakharenkov IA;Rachina SA;Dekhnich NN;Kozlov RS;Sinopalnikov AI;Ivanchik NV;Yatsyshina SB;Elkina MA;Archipenko MV;Gordeeva SA;Lebedeva MS;Portnyagina US |
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Multiplex Tests for Respiratory Tract Infections: The Direct Utility of the FilmArray Respiratory Panel in Emergency Department. |
Can Respir J |
2020 |
Yang S;Li H;Tang Y;Yu F;Ma C;Zhang H;Pang L;Zhao H;Wang L |
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First contact: the role of respiratory cilia in host-pathogen interactions in the airways. |
Am J Physiol Lung Cell Mol Physiol |
2020 |
Kuek LE;Lee RJ |
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Increased Respiratory Viral Detection and Symptom Burden Among Patients with Primary Antibody Deficiency: Results from the BIPAD Study. |
J Allergy Clin Immunol Pract |
2021 |
Ponsford MJ;Price C;Farewell D;Greene G;Moore C;Perry M;Price N;Cottrell S;Steven R;El-Shanawany T;Carne E;Cousins R;Williams P;Schaub A;Vonarburg C;Jolles S |
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32845887
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Association of worsening of nonalcoholic fatty liver disease with cardiometabolic function and intestinal bacterial overgrowth: A cross-sectional study. |
PLoS One |
2020 |
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32890724
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Risk factors for symptoms of infection and microbial carriage among French medical students abroad. |
Int J Infect Dis |
2020 |
Dao TL;Canard N;Hoang VT;Ly TDA;Drali T;Ninove L;Fenollar F;Raoult D;Parola P;Marty P;Gautret P |
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33077301
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Concomitant administration of a liquid formulation of human rotavirus vaccine (porcine circovirus-free) with routine childhood vaccines in infants in the United States: Results from a phase 3, randomized trial. |
Vaccine |
2021 |
Abu-Elyazeed R;Klein NP;Moerman L;Povey M;Pruitt A;Senders S;Silas P;Bi D |
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Developmental patterns in the nasopharyngeal microbiome during infancy are associated with asthma risk. |
J Allergy Clin Immunol |
2021 |
Tang HHF;Lang A;Teo SM;Judd LM;Gangnon R;Evans MD;Lee KE;Vrtis R;Holt PG;Lemanske RF Jr;Jackson DJ;Holt KE;Inouye M;Gern JE |
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High bacterial and viral load in the upper respiratory tract of children in the Democratic Republic of the Congo. |
PLoS One |
2020 |
Muhandule Birindwa A;Gonzales-Siles L;Norden R;Geravandi S;Tumusifu Manegabe J;Morisho L;Saili Mushobekwa S;Andersson R;Skovbjerg S |
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33152186
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SARS-CoV-2 and rhinovirus/enterovirus co-infection in a critically ill young adult patient in Colombia |
Biomedica |
2020 |
Orozco-Hernandez JP;Montoya-Martinez JJ;Pacheco-Gallego MC;Cespedes-Roncancio M;Porras-Hurtado GL |
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33187951
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Using antibiotics wisely for respiratory tract infection in the era of covid-19. |
BMJ |
2020 |
Leis JA;Born KB;Theriault G;Ostrow O;Grill A;Johnston KB |
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33245014
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Reduced rotavirus vaccine efficacy in protein malnourished human-faecal-microbiota-transplanted gnotobiotic pig model is in part attributed to the gut microbiota. |
Benef Microbes |
2020 |
Srivastava V;Deblais L;Huang HC;Miyazaki A;Kandasamy S;Langel SN;Paim FC;Chepngeno J;Kathayat D;Vlasova AN;Saif LJ;Rajashekara G |
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Respiratory viral testing and antibacterial treatment in patients hospitalized with community-acquired pneumonia. |
Infect Control Hosp Epidemiol |
2021 |
Klompas M;Imrey PB;Yu PC;Rhee C;Deshpande A;Haessler S;Zilberberg MD;Rothberg MB |
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33294084
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Detection of Viruses by Multiplex Real-Time Polymerase Chain Reaction in Bronchoalveolar Lavage Fluid of Patients with Nonresponding Community-Acquired Pneumonia. |
Can Respir J |
2020 |
Zhang H;Han Y;Jin Z;Ying Y;Lan F;Huang H;Wang S;Zhou H;Zhang R;Hua W;Shen H;Li W;Yan F |
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33337848
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Incidence and Distribution of Respiratory Microorganisms Causing Acute Respiratory Infections at the University Hospital of Korea. |
Clin Lab |
2020 |
Ham JY;Song KE;Lee NY |
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33353408
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Bacterial and Viral Infection in Patients Hospitalized for Acute Exacerbation of Chronic Obstructive Pulmonary Disease: Implication for Antimicrobial Management and Clinical Outcome. |
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2021 |
Messous S;Elargoubi A;Pillet S;Rajoharison A;Hoffmann J;Trabelsi I;Grissa MH;Boukef R;Beltaief K;Mastouri M;Paranhos-Baccala G;Nouira S;Pozzetto B |
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Upper Respiratory Microbiota in Relation to Ear and Nose Health Among Australian Aboriginal and Torres Strait Islander Children. |
J Pediatric Infect Dis Soc |
2021 |
Coleman A;Bialasiewicz S;Marsh RL;Grahn Hakansson E;Cottrell K;Wood A;Jayasundara N;Ware RS;Zaugg J;Sidjabat HE;Adams J;Ferguson J;Brown M;Roos K;Cervin A |
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33463169
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Antiviral and Antibacterial Nanostructured Surfaces with Excellent Mechanical Properties for Hospital Applications. |
ACS Biomater Sci Eng |
2020 |
Hasan J;Xu Y;Yarlagadda T;Schuetz M;Spann K;Yarlagadda PK |
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33536429
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A Sarcina bacterium linked to lethal disease in sanctuary chimpanzees in Sierra Leone. |
Nat Commun |
2021 |
Owens LA;Colitti B;Hirji I;Pizarro A;Jaffe JE;Moittie S;Bishop-Lilly KA;Estrella LA;Voegtly LJ;Kuhn JH;Suen G;Deblois CL;Dunn CD;Juan-Salles C;Goldberg TL |
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33546631
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Broad range detection of viral and bacterial pathogens in bronchoalveolar lavage fluid of children to identify the cause of lower respiratory tract infections. |
BMC Infect Dis |
2021 |
Wang H;Gu J;Li X;van der Gaast-de Jongh CE;Wang W;He X;Xu Z;Yang Y;de Groot R;de Jonge MI;Zheng Y |
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Identification of Pathogens Potentially Associated with Non-Malarial Fever in Children: A Pilot Study in Peri-Urban Dakar, Senegal. |
Am J Trop Med Hyg |
2021 |
Gildas Boris H;Idrissa D;Marie Louise S;Cheikh T;Mamadou Aliou B;Fatoumata DS;Rebecca G;Raymond B;Diamilatou T;Vincent R;Oumar F;Abdoulaye S;Muriel V |
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33639884
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The clinical application of Filmarray respiratory panel in children especially with severe respiratory tract infections. |
BMC Infect Dis |
2021 |
Pan F;Wang B;Zhang H;Shi Y;Xu Q |
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33750952
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Etiological and epidemiological characteristics of severe acute respiratory infection caused by multiple viruses and Mycoplasma pneumoniae in adult patients in Jinshan, Shanghai: A pilot hospital-based surveillance study. |
PLoS One |
2021 |
Li J;Song CL;Wang T;Ye YL;Du JR;Li SH;Zhu JM |
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33789939
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Escherichia coli Nissle 1917 Enhances Innate and Adaptive Immune Responses in a Ciprofloxacin-Treated Defined-Microbiota Piglet Model of Human Rotavirus Infection. |
mSphere |
2021 |
Michael H;Paim FC;Langel SN;Miyazaki A;Fischer DD;Chepngeno J;Amimo J;Deblais L;Rajashekara G;Saif LJ;Vlasova AN |
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33792490
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Seasonal variation of respiratory viral infections: a comparative study between children with cancer undergoing chemotherapy and children without cancer. |
Pediatr Hematol Oncol |
2021 |
Dror T;Akerman M;Noor A;Weinblatt ME;Islam S;Glasser CL |
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33822151
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Serologic Survey of Selected Pathogens in Free-Ranging Bengal Tigers (Panthera tigris tigris) in Nepal. |
J Wildl Dis |
2021 |
McCauley D;Stout V;Gairhe KP;Sadaula A;Dubovi E;Subedi S;Kaufman GE |
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33956758
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Etiology of Infectious Diseases in Acutely Ill Children at a Pediatric Hospital in Finland. |
Pediatr Infect Dis J |
2021 |
Poyry H;Raappana A;Kiviniemi M;Pokka T;Honkila M;Paalanne N;Valmari P;Renko M;Tapiainen T |
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33964517
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Early Warning of Infection in Patients Undergoing Hematopoietic Stem Cell Transplantation Using Heart Rate Variability and Serum Biomarkers. |
Transplant Cell Ther |
2022 |
Buchan CA;Li HO;Herry CL;Scales N;MacPherson P;Faller E;Bredeson C;Huebsch L;Hodgins M;Seely AJE |
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33969451
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Design of fusion protein for efficient preparation of cyanovirin-n and rapid enrichment of pseudorabies virus. |
Biotechnol Lett |
2021 |
Wang B;Yang Z;Gao D;Wang F;Liu M;Chen G;Ma L;Yu X |
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34018366
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[Respiratory Tract Infection Pathogen Spectrum Study of 376 Pneumoconiosis Inpatients in Chengdu]. |
Sichuan Da Xue Xue Bao Yi Xue Ban |
2021 |
Fan ZW;Li JJ;Li SH;Wu S;Zheng TL;Pei XF |
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34040002
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Cytokine expression patterns in hospitalized children with Bordetella pertussis, Rhinovirus or co-infection. |
Sci Rep |
2021 |
Pandolfi E;Panera N;Alisi A;Carloni E;Russo L;Campagna I;Rizzo C;Concato C;Linardos G;Piccioni L;Jackson S;Villani A;Midulla F;Tozzi AE |
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SARS-CoV-2, other respiratory viruses and bacteria in aerosols: Report from Kuwait\'s hospitals. |
Indoor Air |
2021 |
Habibi N;Uddin S;Al-Salameen F;Al-Amad S;Kumar V;Al-Otaibi M;Razzack NA;Shajan A;Shirshikar F |
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34160830
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Respiratory viruses in the healthy middle ear and middle ear with otitis media with effusion. |
J Med Virol |
2021 |
Durmaz B;Abdulmajed O;Durmaz R;Koroglu M;Ari O;Celik S;Kalcioglu MT |
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34230602
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A split protease-E. coli ClpXP system quantifies protein-protein interactions in Escherichia coli cells. |
Commun Biol |
2021 |
Wang S;Zhang F;Mei M;Wang T;Yun Y;Yang S;Zhang G;Yi L |
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Host transcriptional signatures as predictive markers of infection in children. |
Curr Opin Infect Dis |
2021 |
Mejias A;Cohen S;Glowinski R;Ramilo O |
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34269641
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The impact of the SARS-CoV-2 pandemic on the prevalence of respiratory tract pathogens in patients with community-acquired pneumonia in Germany. |
Emerg Microbes Infect |
2021 |
Dahne T;Bauer W;Essig A;Schaaf B;Spinner CD;Pletz MW;Rohde G;Rupp J;Witzenrath M;Panning M |
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Coinfections with Other Respiratory Pathogens among Patients with COVID-19. |
Microbiol Spectr |
2021 |
Sreenath K;Batra P;Vinayaraj EV;Bhatia R;SaiKiran K;Singh V;Singh S;Verma N;Singh UB;Mohan A;Bhatnagar S;Trikha A;Guleria R;Chaudhry R |
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34408158
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Etiological and epidemiological features of acute respiratory infections in China. |
Nat Commun |
2021 |
Li ZJ;Zhang HY;Ren LL;Lu QB;Ren X;Zhang CH;Wang YF;Lin SH;Zhang XA;Li J;Zhao SW;Yi ZG;Chen X;Yang ZS;Meng L;Wang XH;Liu YL;Wang X;Cui AL;Lai SJ;Jiang T;Yuan Y;Shi LS;Liu MY;Zhu YL;Zhang AR;Zhang ZJ;Yang Y;Ward MP;Feng LZ;Jing HQ;Huang LY;Xu WB;Chen Y;Wu JG;Yuan ZH;Li MF;Wang Y;Wang LP;Fang LQ;Liu W;Hay SI;Gao GF;Yang WZ |
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34419709
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Factors for return to emergency department and hospitalization in elderly urinary tract infection patients. |
Am J Emerg Med |
2021 |
Myoung JY;Hong JY;Lee DH;Lee CA;Park SH;Kim DH;Kim EC;Lim JY;Han S;Choi YH |
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34512621
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Infants Younger Than 90 Days Admitted for Late-Onset Sepsis Display a Reduced Abundance of Regulatory T Cells. |
Front Immunol |
2021 |
Fortmann I;Dammann MT;Siller B;Humberg A;Demmert M;Tushaus L;Lindert J;van Zandbergen V;Pagel J;Rupp J;Herting E;Hartel C |
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Viral and Atypical Bacterial Detection in Young Nepalese Children Hospitalized with Severe Pneumonia. |
Microbiol Spectr |
2021 |
Mathisen M;Basnet S;Christensen A;Sharma AK;Tylden G;Krokstad S;Valentiner-Branth P;Strand TA |
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Gaps in the implementation of COVID-19 mitigation measures could lead to development of new strains of antimicrobial resistant pathogens: Nigerian perspective. |
Pan Afr Med J |
2021 |
Yusuf I;Sarkinfada F |
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Unexpected associations between respiratory viruses and bacteria with Pulmonary Function Testing in children suffering from Cystic Fibrosis (MUCOVIB study). |
J Cyst Fibros |
2022 |
Scherz V;Caruana G;Taffe P;Brouillet R;Bertelli C;Jaton K;Fougere Y;Posfay-Barbe KM;Mornand A;Rochat-Guignard I;Mamin A;Kaiser L;Greub G;Asner SA |
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Frequency of respiratory pathogens other than SARS-CoV-2 detected during COVID-19 testing. |
Diagn Microbiol Infect Dis |
2022 |
Boschiero MN;Duarte A;Palamim CVC;Alvarez AE;Mauch RM;Marson FAL |
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34969624
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Molecular detection of respiratory pathogens in community-acquired pneumonia involving adults. |
J Microbiol Immunol Infect |
2022 |
Lin WH;Chiu HC;Chen KF;Tsao KC;Chen YY;Li TH;Huang YC;Hsieh YC |
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35031041
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Side-by-side comparison of parent vs. technician-collected respiratory swabs in low-income, multilingual, urban communities in the United States. |
BMC Public Health |
2022 |
Chaves SS;Park JH;Prill MM;Whitaker B;Park R;Chew GL |
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35100912
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Breathing Problems and Fever-COVID-19, Metapneumovirus, or Bacterial Infection? Diagnostic Pitfalls of a New Disease. |
Clin Pediatr (Phila) |
2022 |
Friedrich A;Girschick H;Lange R;Klaas M;Barikbin P |
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Antiviral effects of azithromycin: A narrative review. |
Biomed Pharmacother |
2022 |
Khoshnood S;Shirani M;Dalir A;Moradi M;Haddadi MH;Sadeghifard N;Birjandi FS;Yashmi I;Heidary M |
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Clinical Characteristics and Etiology of Community-acquired Pneumonia in US Children, 2015-2018. |
Pediatr Infect Dis J |
2022 |
Yun KW;Wallihan R;Desai A;Alter S;Ambroggio L;Cohen DM;El-Assal O;Marzec S;Florin TA;Keaton M;Shah SS;Ruddy RM;Sharpe S;Leber AL;Everhart K;Mejias A;Ramilo O |
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Seasonal airway microbiome and transcriptome interactions promote childhood asthma exacerbations. |
J Allergy Clin Immunol |
2022 |
McCauley KE;Flynn K;Calatroni A;DiMassa V;LaMere B;Fadrosh DW;Lynch KV;Gill MA;Pongracic JA;Khurana Hershey GK;Kercsmar CM;Liu AH;Johnson CC;Kim H;Kattan M;O'Connor GT;Bacharier LB;Teach SJ;Gergen PJ;Wheatley LM;Togias A;LeBeau P;Presnell S;Boushey HA;Busse WW;Gern JE;Jackson DJ;Altman MC;Lynch SV |
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Prevalence and Clinical Impact of Coinfection in Patients with Coronavirus Disease 2019 in Korea. |
Viruses |
2022 |
Jeong S;Lee N;Park Y;Kim J;Jeon K;Park MJ;Song W |
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Predominant Bacterial and Viral Otopathogens Identified Within the Respiratory Tract and Middle Ear of Urban Australian Children Experiencing Otitis Media Are Diversely Distributed. |
Front Cell Infect Microbiol |
2022 |
Ngo CC;Massa HM;McMonagle BA;Perry CF;Nissen MD;Sloots TP;Thornton RB;Cripps AW |
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Clinical and socioeconomic burden of rhinoviruses/enteroviruses in the community. |
Influenza Other Respir Viruses |
2022 |
Halabi KC;Stockwell MS;Alba L;Vargas C;Reed C;Saiman L |
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Lower respiratory tract infections in children requiring mechanical ventilation: a multicentre prospective surveillance study incorporating airway metagenomics. |
Lancet Microbe |
2022 |
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Etiology and antimicrobial therapy of acute maxillary sinusitis. |
J Infect Dis |
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Hamory BH;Sande MA;Sydnor A Jr;Seale DL;Gwaltney JM Jr |
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