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Evaluation of the BioFire FilmArray Pneumonia Panel for Detection of Viral and Bacterial Pathogens in Lower Respiratory Tract Specimens in the Setting of a Tertiary Care Academic Medical Center. |
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Self-collection: An appropriate alternative during the SARS-CoV-2 pandemic. |
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Viruses and atypical bacteria in the respiratory tract of immunocompromised and immunocompetent patients with airway infection. |
Eur J Clin Microbiol Infect Dis |
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Biennial Upsurge and Molecular Epidemiology of Enterovirus D68 Infection in New York, USA, 2014 to 2018. |
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The Epidemiology of Admission-Requiring Pediatric Respiratory Infections in a Japanese Community Hospital Using Multiplex PCR. |
Jpn J Infect Dis |
2021 |
Inagaki A;Kitano T;Nishikawa H;Suzuki R;Onaka M;Nishiyama A;Kitagawa D;Oka M;Masuo K;Yoshida S |
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No SARS-CoV-2 detection in the German CAPNETZ cohort of community acquired pneumonia before COVID-19 peak in March 2020. |
Infection |
2020 |
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Analysis of Covid-19 and non-Covid-19 viruses, including influenza viruses, to determine the influence of intensive preventive measures in Japan. |
J Clin Virol |
2020 |
Hirotsu Y;Maejima M;Shibusawa M;Amemiya K;Nagakubo Y;Hosaka K;Sueki H;Mochizuki H;Tsutsui T;Kakizaki Y;Miyashita Y;Omata M |
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Investigation of occurrence patterns of respiratory syncytial virus A and B in infected-patients from Cheonan, Korea. |
Respir Res |
2020 |
Kim GY;Rheem I;Joung YH;Kim JK |
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Circulation profile of respiratory viruses in symptomatic and asymptomatic children from Midwest Brazil. |
Braz J Microbiol |
2020 |
Castro IA;Costa LDC;Oliveira ACR;Souza M;das Dores de Paula Cardoso D;Camargos PAM;Costa PSS;Fiaccadori FS |
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Two Cases of Primary Rhinovirus Pneumonia with Multiple Pulmonary Nodules. |
Intern Med |
2021 |
Morimoto Y;Ishiguro T;Kasuga K;Takano K;Ozawa R;Isono T;Akiyama Y;Kobayashi Y;Kobayashi Y;Shimizu Y;Takayanagi N |
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Analytical Performances of the Panther Fusion System for the Detection of Respiratory Viruses in the French National Reference Centre of Lyon, France. |
Microorganisms |
2020 |
Pichon M;Valette M;Schuffenecker I;Billaud G;Lina B |
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Seasonal incidence of respiratory viral infections in Telangana, India: utility of a multiplex PCR assay to bridge the knowledge gap. |
Trop Med Int Health |
2020 |
Anand M;Nimmala P |
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Peptide Nucleic Acid (PNA)-Enhanced Specificity of a Dual-Target Real-Time Quantitative Polymerase Chain Reaction (RT-qPCR) Assay for the Detection and Differentiation of SARS-CoV-2 from Related Viruses. |
Diagnostics (Basel) |
2020 |
Choi WS;Jeong JH;Nicolas HDG;Oh S;Antigua KJC;Park JH;Kim B;Yoon SW;Shin KS;Choi YK;Baek YH;Song MS |
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Surveillance of respiratory viruses among children attending a primary school in rural coastal Kenya. |
Wellcome Open Res |
2020 |
Adema IW;Kamau E;Uchi Nyiro J;Otieno GP;Lewa C;Munywoki PK;Nokes DJ |
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Respiratory viruses and febrile response in children with febrile seizures: A cohort study and embedded case-control study. |
Seizure |
2021 |
Hautala M;Arvila J;Pokka T;Mikkonen K;Koskela U;Helander H;Glumoff V;Rantala H;Tapiainen T |
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Bacterial and Viral Infection in Patients Hospitalized for Acute Exacerbation of Chronic Obstructive Pulmonary Disease: Implication for Antimicrobial Management and Clinical Outcome. |
COPD |
2021 |
Messous S;Elargoubi A;Pillet S;Rajoharison A;Hoffmann J;Trabelsi I;Grissa MH;Boukef R;Beltaief K;Mastouri M;Paranhos-Baccala G;Nouira S;Pozzetto B |
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Novel dual multiplex real-time RT-PCR assays for the rapid detection of SARS-CoV-2, influenza A/B, and respiratory syncytial virus using the BD MAX open system. |
Emerg Microbes Infect |
2021 |
Chung HY;Jian MJ;Chang CK;Lin JC;Yeh KM;Chen CW;Chiu SK;Wang YH;Liao SJ;Li SY;Hsieh SS;Tsai SH;Perng CL;Yang JR;Liu MT;Chang FY;Shang HS |
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Rhinovirus-Infected Patients in the COVID-19 Pandemic Period. |
Infect Drug Resist |
2021 |
Watanabe Y;Kamioka Y;Seki M |
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Microbiology of Acute Maxillary Sinusitis in Children. |
Laryngoscope |
2021 |
Sawada S;Matsubara S |
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Future antiviral polymers by plasma processing. |
Prog Polym Sci |
2021 |
Ma C;Nikiforov A;De Geyter N;Dai X;Morent R;Ostrikov KK |
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SARS-CoV-2, other respiratory viruses and bacteria in aerosols: Report from Kuwait\'s hospitals. |
Indoor Air |
2021 |
Habibi N;Uddin S;Al-Salameen F;Al-Amad S;Kumar V;Al-Otaibi M;Razzack NA;Shajan A;Shirshikar F |
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Respiratory viruses in the healthy middle ear and middle ear with otitis media with effusion. |
J Med Virol |
2021 |
Durmaz B;Abdulmajed O;Durmaz R;Koroglu M;Ari O;Celik S;Kalcioglu MT |
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Molecular detections of coronavirus: current and emerging methodologies. |
Expert Rev Anti Infect Ther |
2022 |
Diao M;Lang L;Feng J;Li R |
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Coinfections with Other Respiratory Pathogens among Patients with COVID-19. |
Microbiol Spectr |
2021 |
Sreenath K;Batra P;Vinayaraj EV;Bhatia R;SaiKiran K;Singh V;Singh S;Verma N;Singh UB;Mohan A;Bhatnagar S;Trikha A;Guleria R;Chaudhry R |
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The Positive Rhinovirus/Enterovirus Detection and SARS-CoV-2 Persistence beyond the Acute Infection Phase: An Intra-Household Surveillance Study. |
Viruses |
2021 |
Brotons P;Jordan I;Bassat Q;Henares D;Fernandez de Sevilla M;Ajanovic S;Redin A;Fumado V;Baro B;Claverol J;Varo R;Cuadras D;Hecht J;Barrabeig I;Garcia-Garcia JJ;Launes C;Munoz-Almagro C |
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Challenges in navigating molecular diagnostics for common equine respiratory viruses. |
Vet J |
2021 |
Pusterla N;Leutenegger CM;Barnum S;Wademan C;Hodzic E |
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A Multicenter Study of Viral Aetiology of Community-Acquired Pneumonia in Hospitalized Children in Chinese Mainland. |
Virol Sin |
2021 |
Zhu Y;Xu B;Li C;Chen Z;Cao L;Fu Z;Shang Y;Chen A;Deng L;Bao Y;Sun Y;Ning L;Yu S;Gu F;Liu C;Yin J;Shen A;Xie Z;Shen K |
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High rate of bacterial respiratory tract co-infections upon admission amongst moderate to severe COVID-19 patients. |
Infect Dis (Lond) |
2022 |
Cohen R;Finn T;Babushkin F;Geller K;Alexander H;Shapiro M;Uda M;Mostrchy AR;Amash R;Shimoni Z;Paikin S;Ilani A;Lellouche J |
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Routine, Cost-Effective SARS-CoV-2 Surveillance Testing Using Pooled Saliva Limits Viral Spread on a Residential College Campus. |
Microbiol Spectr |
2021 |
Vander Schaaf NA;Fund AJ;Munnich BV;Zastrow AL;Fund EE;Senti TL;Lynn AF;Kane JJ;Love JL;Long GJ;Troendle NJ;Sharda DR |
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Detection of respiratory pathogens by application of multiplex PCR panel during early period of COVID-19 pandemic in a tertiary hospital in Central Taiwan. |
J Microbiol Immunol Infect |
2021 |
Chiu YT;Tien N;Lin HC;Wei HM;Lai HC;Chen JA;Low YY;Lin HH;Hsu YL;Hwang KP |
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Viral and Atypical Bacterial Detection in Young Nepalese Children Hospitalized with Severe Pneumonia. |
Microbiol Spectr |
2021 |
Mathisen M;Basnet S;Christensen A;Sharma AK;Tylden G;Krokstad S;Valentiner-Branth P;Strand TA |
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POCT Detection of 14 Respiratory Viruses Using Multiplex RT-PCR. |
Biochip J |
2021 |
Lee JS;Ahn JJ;Kim SJ;Yu SY;Koh EJ;Kim SH;Sung HS;Huh JW;Hwang SY |
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Targeting the P2Y13 Receptor Suppresses IL-33 and HMGB1 Release and Ameliorates Experimental Asthma. |
Am J Respir Crit Care Med |
2022 |
Werder RB;Ullah MA;Rahman MM;Simpson J;Lynch JP;Collinson N;Rittchen S;Rashid RB;Sikder MAA;Handoko HY;Curren BF;Sebina I;Hartel G;Bissell A;Ngo S;Yarlagadda T;Hasnain SZ;Lu W;Sohal SS;Martin M;Bowler S;Burr LD;Martinez LO;Robaye B;Spann K;Ferreira MAR;Phipps S |
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Comparative Evaluation of Allplex Respiratory Panels 1, 2, 3, and BioFire FilmArray Respiratory Panel for the Detection of Respiratory Infections. |
Diagnostics (Basel) |
2021 |
Lade H;Kim JM;Chung Y;Han M;Mo EK;Kim JS |
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| 35118597
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Molecular investigation of human metapneumovirus in children with acute respiratory infections in Chennai, South India, from 2016-2018. |
Braz J Microbiol |
2022 |
Hindupur A;Menon T;Dhandapani P |
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Rhinoviruses: molecular diversity and clinical characteristics. |
Int J Infect Dis |
2022 |
Bouzid D;Hadad O;Bertine M;Houhou-Fidouh N;Mirand A;Duval X;Bunel V;Borie R;Lucet JC;Descamps D;Visseaux B |
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Etiology and the challenge of diagnostic testing of community-acquired pneumonia in children and adolescents. |
BMC Pediatr |
2022 |
Rueda ZV;Aguilar Y;Maya MA;Lopez L;Restrepo A;Garces C;Morales O;Roya-Pabon C;Trujillo M;Arango C;Copete AR;Vera C;Giraldo MR;Herrera M;Velez LA |
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Retrospective evaluation of viral respiratory tract infections in a university hospital in Ankara, Turkey (2016-2019). |
J Infect Dev Ctries |
2022 |
Altay-Kocak A;Sarzhanova S;Tapisiz A;Dizbay M;Basustaoglu A;Bozdayi G |
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Use of a multiplex polymerase chain reaction assay for the early detection of an outbreak of human parainfluenza virus type 3 infection in a nursery school during the COVID-19 pandemic. |
Infect Prev Pract |
2022 |
Suzuki J;Endo S;Mizuno T;Takahashi S;Horiuchi Y;Ami Y;Imai H;Shimada D;Yoshida M;Kaku M;Seki M |
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| 35693466
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A retrospective study examining the clinical significance of testing respiratory panels in children who presented to a tertiary hospital in 2019. |
Access Microbiol |
2022 |
Almannaei L;Alsaadoon E;AlbinAli S;Taha M;Lambert I |
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| 35700877
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Pathogens detected using a syndromic molecular diagnostic platform in patients hospitalized with severe respiratory illness in South Africa in 2017. |
Int J Infect Dis |
2022 |
Moleleki M;du Plessis M;Ndlangisa K;Reddy C;Hellferscee O;Mekgoe O;McMorrow M;Walaza S;Cohen C;Tempia S;von Gottberg A;Wolter N |
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| 35741313
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COVID-19 Diagnosis: A Comprehensive Review of the RT-qPCR Method for Detection of SARS-CoV-2. |
Diagnostics (Basel) |
2022 |
Dutta D;Naiyer S;Mansuri S;Soni N;Singh V;Bhat KH;Singh N;Arora G;Mansuri MS |
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| 36127976
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Viral Bronchiolo-Alveolitis From Coronavirus OC43 and Rhinovirus-Simulating SARS-CoV-2 Infection. |
Cureus |
2022 |
Alaoui-Inboui FZ;Bouchra S |
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| 36154273
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Multiplex PCR Detection of Respiratory Tract Infections in SARS-CoV-2-Negative Patients Admitted to the Emergency Department: an International Multicenter Study during the COVID-19 Pandemic. |
Microbiol Spectr |
2022 |
Duclos M;Hommel B;Allantaz F;Powell M;Posteraro B;Sanguinetti M |
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| 36280020
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Respiratory virus detection in returning travelers and pilgrims from the Middle East. |
Travel Med Infect Dis |
2022 |
Mercier A;Meheut A;Alidjinou EK;Lazrek M;Faure K;Hober D;Engelmann I |
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| 36381618
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Viral Coinfections in Hospitalized Coronavirus Disease 2019 Patients Recruited to the International Severe Acute Respiratory and Emerging Infections Consortium WHO Clinical Characterisation Protocol UK Study. |
Open Forum Infect Dis |
2022 |
Vink E;Davis C;MacLean A;Pascall D;McDonald SE;Gunson R;Hardwick HE;Oosthuyzen W;Openshaw PJM;Baillie JK;Semple MG;Ho A |
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| 36539100
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Occurrence of multiple respiratory viruses in wastewater in Queensland, Australia: Potential for community disease surveillance. |
Sci Total Environ |
2023 |
Ahmed W;Bivins A;Stephens M;Metcalfe S;Smith WJM;Sirikanchana K;Kitajima M;Simpson SL |
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| 36558876
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Changes in the Epidemiology of Respiratory Pathogens in Children during the COVID-19 Pandemic. |
Pathogens |
2022 |
Lamrani Hanchi A;Guennouni M;Ben Houmich T;Echchakery M;Draiss G;Rada N;Younous S;Bouskraoui M;Soraa N |
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Hunting for mpox (monkeypox) mimickers: Use of the Biofire meningitis/encephalitis panel on lesion swabs to support alternative viral diagnoses. |
J Clin Virol |
2023 |
Joy BK;Donovan AL;McCracken GR;Pettipas J;Grudeski E;Majer A;Mandes R;Booth TF;Hatchette TF;Patriquin G;LeBlanc JJ |
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| 36681556
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Impact of multiplex polymerase chain reaction syndromic panel on antibiotic use among hospitalized children with respiratory tract illness during COVID-19 pandemic. |
J Microbiol Immunol Infect |
2023 |
Tiew WT;Chen YC;Hsiao HL;Chen CL;Chen CJ;Chiu CH |
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| 36708772
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Agreement of respiratory viruses\' detection between nasopharyngeal swab and bronchoalveolar lavage in adults admitted for pneumonia: a retrospective study. |
Clin Microbiol Infect |
2023 |
Bouzid D;Hingrat QL;Salipante F;Ferre VM;Chevallier T;Tubiana S;Lucet JC;Choquet C;Yazdanpanah Y;Timsit JF;Descamps D;Houhou N;Visseaux B;Loubet P |
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| 36786897
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A multiplex-NGS approach to identifying respiratory RNA viruses during the COVID-19 pandemic. |
Arch Virol |
2023 |
Ramos N;Panzera Y;Frabasile S;Tomas G;Calleros L;Marandino A;Goni N;Techera C;Grecco S;Fuques E;Coppola L;Ramas V;Morel MN;Mogdasy C;Chiparelli H;Arbiza J;Perez R;Delfraro A |
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| 36833540
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Vertical Transmission of Coxsackievirus A6 with Severe Congenital Pneumonia/Sepsis. |
Int J Environ Res Public Health |
2023 |
Nakasone R;Ogi M;Kawamura A;Miyake O;Kido T;Abe S;Takahashi N;Nozu K;Fujioka K |
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| 36919088
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Epidemiology of respiratory tract infections using multiplex PCR in a Japanese acute care hospital during the COVID19 pandemic. |
Heliyon |
2023 |
Kitagawa D;Kitano T;Furumori M;Suzuki S;Shintani Y;Suzuki Y;Nakano A;Nakano R;Nishiyama A;Yoshida S;Yano H;Maeda K;Nakamura F |
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| 36935913
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Characterization of viral pathogens associated with symptomatic upper respiratory tract infection in adults during a low COVID-19 transmission period. |
PeerJ |
2023 |
Sandybayev N;Beloussov V;Strochkov V;Solomadin M;Granica J;Yegorov S |
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| 36968956
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Viral Etiology and Clinical Characteristics of Acute Respiratory Tract Infections in Hospitalized Children in Southern Germany (2014-2018). |
Open Forum Infect Dis |
2023 |
Tabatabai J;Ihling CM;Manuel B;Rehbein RM;Schnee SV;Hoos J;Pfeil J;Grulich-Henn J;Schnitzler P |
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| 37039708
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The Clinical Performance of the BioCode Respiratory Pathogen Panel for the Detection of Viruses and Bacteria from Nasopharyngeal Swabs. |
Microbiol Spectr |
2023 |
Zhang X;Knoth C;Pham A;Lima A;Dominguez R;Ibarra-Flores I;Lopez JC;Uy D;Silbert S;Patel A;Aye M;Tang YW;Dien Bard J |
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| 37193516
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Utility of multiplex real-time PCR for diagnosing paediatric acute respiratory tract infection in a tertiary care hospital. |
Med J Armed Forces India |
2023 |
Kumar A;Bahal A;Singh L;Ninawe SM;Grover N;Suman N |
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| 37333509
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Development of RT-qPCR for quantification of human enterovirus D68 in vitro. |
MethodsX |
2023 |
Lillerovde Orstenvik H;Tveten AK;Cao Y |
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| 37370910
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Expanded PCR Panel Testing for Identification of Respiratory Pathogens and Coinfections in Influenza-like Illness. |
Diagnostics (Basel) |
2023 |
Upadhyay P;Reddy J;Proctor T;Sorel O;Veereshlingam H;Gandhi M;Wang X;Singh V |
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| 37630611
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Aetiology of Community-Acquired Pneumonia and the Role of Genetic Host Factors in Hospitalized Patients in Cyprus. |
Microorganisms |
2023 |
Ladas P;Porfyridis I;Tryfonos C;Ioannou A;Adamide T;Christodoulou C;Richter J |
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| 37766227
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The Seasonality of Respiratory Viruses in a Hong Kong Hospital, 2014-2023. |
Viruses |
2023 |
Chan WS;Yau SK;To MY;Leung SM;Wong KP;Lai KC;Wong CY;Leung CP;Au CH;Wan TS;Ma ES;Tang BS |
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| 37842349
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Seasonal Prevalence of Respiratory Pathogens Among Children in the United Arab Emirates: A Multicenter Cross-Sectional Study in the Pre-COVID-19 Era. |
Cureus |
2023 |
Salim S;Celiloglu H;Tayyab F;Malik ZA |
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