PMID Title Journal Publication Year Author View in RVdb
10466788 Sequence analysis of a porcine enterovirus serotype 1 isolate: relationships with other picornaviruses. J Gen Virol 1999 Doherty M;Todd D;McFerran N;Hoey EM View More
10559308 Similar interactions of the poliovirus and rhinovirus 3D polymerases with the 3\' untranslated region of rhinovirus 14. J Virol 1999 Meredith JM;Rohll JB;Almond JW;Evans DJ View More
10637319 Analysis of the c-myc IRES; a potential role for cell-type specific trans-acting factors and the nuclear compartment. Nucleic Acids Res 2000 Stoneley M;Subkhankulova T;Le Quesne JP;Coldwell MJ;Jopling CL;Belsham GJ;Willis AE View More
10775595 Identification of a cis-acting replication element within the poliovirus coding region. J Virol 2000 Goodfellow I;Chaudhry Y;Richardson A;Meredith J;Almond JW;Barclay W;Evans DJ View More
11434774 Structure of an RNA hairpin from HRV-14. Biochemistry 2001 Huang H;Alexandrov A;Chen X;Barnes TW 3rd;Zhang H;Dutta K;Pascal SM View More
11497431 Poly(rC) binding proteins mediate poliovirus mRNA stability. RNA 2001 Murray KE;Roberts AW;Barton DJ View More
11911365 Determinants of the recognition of enteroviral cloverleaf RNA by coxsackievirus B3 proteinase 3C. RNA 2002 Zell R;Sidigi K;Bucci E;Stelzner A;Gorlach M View More
12097561 Sequence requirements for viral RNA replication and VPg uridylylation directed by the internal cis-acting replication element (cre) of human rhinovirus type 14. J Virol 2002 Yang Y;Rijnbrand R;McKnight KL;Wimmer E;Paul A;Martin A;Lemon SM View More
12368304 Poliovirus internal ribosome entry segment structure alterations that specifically affect function in neuronal cells: molecular genetic analysis. J Virol 2002 Malnou CE;Poyry TA;Jackson RJ;Kean KM View More
12554882 Structure and function analysis of the poliovirus cis-acting replication element (CRE). RNA 2003 Goodfellow IG;Kerrigan D;Evans DJ View More
12743317 Viral internal ribosome entry site structures segregate into two distinct morphologies. J Virol 2003 Beales LP;Holzenburg A;Rowlands DJ View More
12867653 Analysis of the cloverleaf element in a human rhinovirus type 14/poliovirus chimera: correlation of subdomain D structure, ternary protein complex formation and virus replication. J Gen Virol 2003 Rieder E;Xiang W;Paul A;Wimmer E View More
1315956 Towards identification of cis-acting elements involved in the replication of enterovirus and rhinovirus RNAs: a proposal for the existence of tRNA-like terminal structures. Nucleic Acids Res 1992 Pilipenko EV;Maslova SV;Sinyakov AN;Agol VI View More
1316679 Initiation of translation of human rhinovirus RNA: mapping the internal ribosome entry site. Virology 1992 Borman A;Jackson RJ View More
1328850 [Probable compact structure of a cis-active translation element in the 5\'-untranslated region of the enterovirus and rhinovirus genome]. Mol Biol (Mosk) 1992 Pilipenko EV;Maslova SV;Agol VI View More
1333125 Conserved tertiary structure elements in the 5\' untranslated region of human enteroviruses and rhinoviruses. Virology 1992 Le SY;Chen JH;Sonenberg N;Maizel JV View More
14645707 Activity of a type 1 picornavirus internal ribosomal entry site is determined by sequences within the 3\' nontranslated region. Proc Natl Acad Sci U S A 2003 Dobrikova E;Florez P;Bradrick S;Gromeier M View More
14711816 Genetic evidence for an interaction between a picornaviral cis-acting RNA replication element and 3CD protein. J Biol Chem 2004 Yang Y;Rijnbrand R;Watowich S;Lemon SM View More
15136038 Gaining target access for deoxyribozymes. J Mol Biol 2004 Schubert S;Furste JP;Werk D;Grunert HP;Zeichhardt H;Erdmann VA;Kurreck J View More
15314212 High-resolution structure of a picornaviral internal cis-acting RNA replication element (cre). Proc Natl Acad Sci U S A 2004 Thiviyanathan V;Yang Y;Kaluarachchi K;Rijnbrand R;Gorenstein DG;Lemon SM View More
157835 Functional analysis of the replicator structure of lambdoid bacteriophage DNAs. Cold Spring Harb Symp Quant Biol 1979 Hobom G;Grosschedl R;Lusky M;Scherer G;Schwarz E;Kossel H View More
15814817 A novel cGUUAg tetraloop structure with a conserved yYNMGg-type backbone conformation from cloverleaf 1 of bovine enterovirus 1 RNA. Nucleic Acids Res 2005 Ihle Y;Ohlenschlager O;Hafner S;Duchardt E;Zacharias M;Seitz S;Zell R;Ramachandran R;Gorlach M View More
15858012 Genetic determinants of cell type-specific poliovirus propagation in HEK 293 cells. J Virol 2005 Campbell SA;Lin J;Dobrikova EY;Gromeier M View More
1602550 Conservation of RNA-protein interactions among picornaviruses. J Virol 1992 Dildine SL;Semler BL View More
16140772 An authentic 3\' noncoding region is necessary for efficient poliovirus replication. J Virol 2005 Brown DM;Cornell CT;Tran GP;Nguyen JH;Semler BL View More
16175335 Classification and structure of echovirus 5\'-UTR sequences. Virus Genes 2005 Siafakas N;Papaventsis D;Levidiotou-Stefanou S;Vamvakopoulos NC;Markoulatos P View More
16361422 Structural and functional characterization of the coxsackievirus B3 CRE(2C): role of CRE(2C) in negative- and positive-strand RNA synthesis. J Gen Virol 2006 van Ooij MJM;Vogt DA;Paul A;Castro C;Kuijpers J;van Kuppeveld FJM;Cameron CE;Wimmer E;Andino R;Melchers WJG View More
1649449 Two dimensional single-strand conformation polymorphism analysis: a useful tool for the detection of mutations in long DNA fragments. Nucleic Acids Res 1991 Kovar H;Jug G;Auer H;Skern T;Blaas D View More
17194719 NMR structure of stem-loop D from human rhinovirus-14. RNA 2007 Headey SJ;Huang H;Claridge JK;Soares GA;Dutta K;Schwalbe M;Yang D;Pascal SM View More
17291581 Dynamic force microscopy imaging of plasmid DNA and viral RNA. Biomaterials 2007 Kienberger F;Costa LT;Zhu R;Kada G;Reithmayer M;Chtcheglova L;Rankl C;Pacheco AB;Thalhammer S;Pastushenko V;Heckl WM;Blaas D;Hinterdorfer P View More
17609276 Replication of poliovirus requires binding of the poly(rC) binding protein to the cloverleaf as well as to the adjacent C-rich spacer sequence between the cloverleaf and the internal ribosomal entry site. J Virol 2007 Toyoda H;Franco D;Fujita K;Paul AV;Wimmer E View More
17623054 New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features. BMC Genomics 2007 Tapparel C;Junier T;Gerlach D;Cordey S;Van Belle S;Perrin L;Zdobnov EM;Kaiser L View More
17855535 Human rhinovirus type 14 gain-of-function mutants for oriI utilization define residues of 3C(D) and 3Dpol that contribute to assembly and stability of the picornavirus VPg uridylylation complex. J Virol 2007 Shen M;Wang Q;Yang Y;Pathak HB;Arnold JJ;Castro C;Lemon SM;Cameron CE View More
17947529 Internal initiation of translation from the human rhinovirus-2 internal ribosome entry site requires the binding of Unr to two distinct sites on the 5\' untranslated region. J Gen Virol 2007 Anderson EC;Hunt SL;Jackson RJ View More
18086560 Poly(rC)-binding protein 2 interacts with the oligo(rC) tract of coxsackievirus B3. Biochem Biophys Res Commun 2008 Zell R;Ihle Y;Seitz S;Gundel U;Wutzler P;Gorlach M View More
18201745 Molecular and phylogenetic analyses of bovine rhinovirus type 2 shows it is closely related to foot-and-mouth disease virus. Virology 2008 Hollister JR;Vagnozzi A;Knowles NJ;Rieder E View More
1846205 An RNA hairpin at the extreme 5\' end of the poliovirus RNA genome modulates viral translation in human cells. J Virol 1991 Simoes EA;Sarnow P View More
18541697 The cis-acting replication elements define human enterovirus and rhinovirus species. RNA 2008 Cordey S;Gerlach D;Junier T;Zdobnov EM;Kaiser L;Tapparel C View More
18656221 The linker domain of poly(rC) binding protein 2 is a major determinant in poliovirus cap-independent translation. Virology 2008 Sean P;Nguyen JH;Semler BL View More
18684812 Identification of a conserved RNA replication element (cre) within the 3Dpol-coding sequence of hepatoviruses. J Virol 2008 Yang Y;Yi M;Evans DJ;Simmonds P;Lemon SM View More
18692097 Relevance of RNA structure for the activity of picornavirus IRES elements. Virus Res 2009 Fernandez-Miragall O;Lopez de Quinto S;Martinez-Salas E View More
19213880 Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. Science 2009 Palmenberg AC;Spiro D;Kuzmickas R;Wang S;Djikeng A;Rathe JA;Fraser-Liggett CM;Liggett SB View More
1957717 The 5\'-untranslated region of picornaviral genomes. Adv Virus Res 1991 Agol VI View More
19661910 Architecture and secondary structure of an entire HIV-1 RNA genome. Nature 2009 Watts JM;Dang KK;Gorelick RJ;Leonard CW;Bess JW Jr;Swanstrom R;Burch CL;Weeks KM View More
1966843 Cap-independent translation of picornavirus RNAs: structure and function of the internal ribosomal entry site. Enzyme 1990 Jang SK;Pestova TV;Hellen CU;Witherell GW;Wimmer E View More
197259 Relationship between Moloney murine leukemia and sarcoma virus RNAs: purification and hybridization map of complementary DNAs from defined regions of Moloney murine sarcoma virus 124. J Virol 1977 Dina D;Beemon K View More
20427535 Mechanism of initiation site selection promoted by the human rhinovirus 2 internal ribosome entry site. J Virol 2010 Kaminski A;Poyry TA;Skene PJ;Jackson RJ View More
2162521 Gross rearrangements within the 5\'-untranslated region of the picornaviral genomes. Nucleic Acids Res 1990 Pilipenko EV;Blinov VM;Agol VI View More
2172447 The complete nucleotide sequence of enterovirus type 70: relationships with other members of the picornaviridae. J Gen Virol 1990 Ryan MD;Jenkins O;Hughes PJ;Brown A;Knowles NJ;Booth D;Minor PD;Almond JW View More
2175364 Common structures of the 5\' non-coding RNA in enteroviruses and rhinoviruses. Thermodynamical stability and statistical significance. J Mol Biol 1990 Le SY;Zuker M View More
22031931 Modification of the untranslated regions of human enterovirus 71 impairs growth in a cell-specific manner. J Virol 2012 Kok CC;Phuektes P;Bek E;McMinn PC View More
22039520 LL37 and cationic peptides enhance TLR3 signaling by viral double-stranded RNAs. PLoS One 2011 Lai Y;Adhikarakunnathu S;Bhardwaj K;Ranjith-Kumar CT;Wen Y;Jordan JL;Wu LH;Dragnea B;San Mateo L;Kao CC View More
23592991 Viral uncoating is directional: exit of the genomic RNA in a common cold virus starts with the poly-(A) tail at the 3\'-end. PLoS Pathog 2013 Harutyunyan S;Kumar M;Sedivy A;Subirats X;Kowalski H;Kohler G;Blaas D View More
24277846 Uncoating of common cold virus is preceded by RNA switching as determined by X-ray and cryo-EM analyses of the subviral A-particle. Proc Natl Acad Sci U S A 2013 Pickl-Herk A;Luque D;Vives-Adrian L;Querol-Audi J;Garriga D;Trus BL;Verdaguer N;Blaas D;Caston JR View More
2536978 Conserved structural domains in the 5\'-untranslated region of picornaviral genomes: an analysis of the segment controlling translation and neurovirulence. Virology 1989 Pilipenko EV;Blinov VM;Romanova LI;Sinyakov AN;Maslova SV;Agol VI View More
2547075 New model for the secondary structure of the 5\' non-coding RNA of poliovirus is supported by biochemical and genetic data that also show that RNA secondary structure is important in neurovirulence. J Mol Biol 1989 Skinner MA;Racaniello VR;Dunn G;Cooper J;Minor PD;Almond JW View More
2548167 Conservation of the secondary structure elements of the 5\'-untranslated region of cardio- and aphthovirus RNAs. Nucleic Acids Res 1989 Pilipenko EV;Blinov VM;Chernov BK;Dmitrieva TM;Agol VI View More
26518063 Secondary structure conservation of the stem-loop IV sub-domain of internal ribosomal entry sites in human rhinovirus clinical isolates. Int J Infect Dis 2015 Kim H;Kim K;Kwon T;Kim DW;Kim SS;Kim YJ View More
28376123 A novel enterovirus species identified from severe diarrheal goats. PLoS One 2017 Wang M;He J;Lu H;Liu Y;Deng Y;Zhu L;Guo C;Tu C;Wang X View More
2838971 Comparative sequence analysis of the 5\' noncoding region of the enteroviruses and rhinoviruses. Virology 1988 Rivera VM;Welsh JD;Maizel JV Jr View More
28459542 Structure of RNA Stem Loop B from the Picornavirus Replication Platform. Biochemistry 2017 Warden MS;Tonelli M;Cornilescu G;Liu D;Hopersberger LJ;Ponniah K;Pascal SM View More
30578285 Conformational flexibility in the enterovirus RNA replication platform. RNA 2019 Warden MS;Cai K;Cornilescu G;Burke JE;Ponniah K;Butcher SE;Pascal SM View More
32994533 Individual subunits of a rhinovirus causing common cold exhibit largely different protein-RNA contact site conformations. Commun Biol 2020 Blaas D View More
33947819 ICAM-1 induced rearrangements of capsid and genome prime rhinovirus 14 for activation and uncoating. Proc Natl Acad Sci U S A 2021 Hrebik D;Fuzik T;Gondova M;Smerdova L;Adamopoulos A;Sedo O;Zdrahal Z;Plevka P View More
7474094 Cell proteins bind to a linear polypyrimidine-rich sequence within the 5\'-untranslated region of rhinovirus 14 RNA. J Virol 1995 Rojas-Eisenring IA;Cajero-Juarez M;del Angel RM View More
7494295 The 3\' untranslated region of picornavirus RNA: features required for efficient genome replication. J Virol 1995 Rohll JB;Moon DH;Evans DJ;Almond JW View More
7745714 Interaction between the 5\'-terminal cloverleaf and 3AB/3CDpro of poliovirus is essential for RNA replication. J Virol 1995 Xiang W;Harris KS;Alexander L;Wimmer E View More
7782313 Sequence and structural determinants of the interaction between the 5\'-noncoding region of picornavirus RNA and rhinovirus protease 3C. J Biol Chem 1995 Walker PA;Leong LE;Porter AG View More
7832636 The nucleotide sequence of the 5\'non-coding and capsid coding genome regions of two bovine enterovirus strains. Arch Virol 1994 McNally RM;Earle JA;McIlhatton M;Hoey EM;Martin SJ View More
8207812 The 5\'-untranslated regions of picornavirus RNAs contain independent functional domains essential for RNA replication and translation. J Virol 1994 Rohll JB;Percy N;Ley R;Evans DJ;Almond JW;Barclay WS View More
8389442 Conserved tertiary structural elements in the 5\' nontranslated region of cardiovirus, aphthovirus and hepatitis A virus RNAs. Nucleic Acids Res 1993 Le SY;Chen JH;Sonenberg N;Maizel JV Jr View More
8553572 Cis-acting elements of the encephalomyocarditis virus internal ribosomal entry site. Virology 1995 Witherell GW;Schultz-Witherell CS;Wimmer E View More
8637880 Internal ribosomal entry site substitution eliminates neurovirulence in intergeneric poliovirus recombinants. Proc Natl Acad Sci U S A 1996 Gromeier M;Alexander L;Wimmer E View More
8668546 Structure-infectivity analysis of the human rhinovirus genomic RNA 3\' non-coding region. Nucleic Acids Res 1996 Todd S;Semler BL View More
8879130 A common structural core in the internal ribosome entry sites of picornavirus, hepatitis C virus, and pestivirus. Virus Genes 1996 Le SY;Siddiqui A;Maizel JV Jr View More
9457241 Modeling RNA-ligand interactions: the Rev-binding element RNA-aminoglycoside complex. J Med Chem 1998 Leclerc F;Cedergren R View More
9498619 Application of genome sequence information to the classification of bovine enteroviruses: the importance of 5\'- and 3\'-nontranslated regions. Virus Res 1997 Zell R;Stelzner A View More
9562889 Evolution of a common structural core in the internal ribosome entry sites of picornavirus. Virus Genes 1998 Le SY;Maizel JV Jr View More
9568965 A common RNA motif in the 3\' end of the genomes of astroviruses, avian infectious bronchitis virus and an equine rhinovirus. J Gen Virol 1998 Jonassen CM;Jonassen TO;Grinde B View More
9570321 Utilization of a mammalian cell-based RNA binding assay to characterize the RNA binding properties of picornavirus 3C proteinases. RNA 1998 Blair WS;Parsley TB;Bogerd HP;Towner JS;Semler BL;Cullen BR View More
9647786 Structural conservation in RNA loops III and VI of the internal ribosome entry sites of enteroviruses and rhinoviruses. Biochem Biophys Res Commun 1998 Klinck R;Sprules T;Gehring K View More
9680135 Binding of a cellular factor to the 3\' untranslated region of the RNA genomes of entero- and rhinoviruses plays a role in virus replication. J Gen Virol 1998 Mellits KH;Meredith JM;Rohll JB;Evans DJ;Almond JW View More
9848654 The rhinovirus type 14 genome contains an internally located RNA structure that is required for viral replication. RNA 1998 McKnight KL;Lemon SM View More
9882296 Dual stem loops within the poliovirus internal ribosomal entry site control neurovirulence. J Virol 1999 Gromeier M;Bossert B;Arita M;Nomoto A;Wimmer E View More