PMID Title Journal Publication Year Author View in RVdb
17054069 MassTag polymerase-chain-reaction detection of respiratory pathogens, including a new rhinovirus genotype, that caused influenza-like illness in New York State during 2004-2005. J Infect Dis 2006 Lamson D;Renwick N;Kapoor V;Liu Z;Palacios G;Ju J;Dean A;St George K;Briese T;Lipkin WI View More
19089556 Comprehensive detection of causative pathogens using real-time PCR to diagnose pediatric community-acquired pneumonia. J Infect Chemother 2008 Hamano-Hasegawa K;Morozumi M;Nakayama E;Chiba N;Murayama SY;Takayanagi R;Iwata S;Sunakawa K;Ubukata K View More
21851481 Viruses and bacteria in sputum samples of children with community-acquired pneumonia. Clin Microbiol Infect 2012 Honkinen M;Lahti E;Osterback R;Ruuskanen O;Waris M View More
21915878 High detection rates of nucleic acids of a wide range of respiratory viruses in the nasopharynx and the middle ear of children with a history of recurrent acute otitis media. J Med Virol 2011 Wiertsema SP;Chidlow GR;Kirkham LA;Corscadden KJ;Mowe EN;Vijayasekaran S;Coates HL;Harnett GB;Richmond PC View More
21998418 Comparison of the FilmArray Respiratory Panel and Prodesse real-time PCR assays for detection of respiratory pathogens. J Clin Microbiol 2011 Loeffelholz MJ;Pong DL;Pyles RB;Xiong Y;Miller AL;Bufton KK;Chonmaitree T View More
22481423 Prevalence of and risk factors for human rhinovirus infection in healthy aboriginal and non-aboriginal Western Australian children. Pediatr Infect Dis J 2012 Annamalay AA;Khoo SK;Jacoby P;Bizzintino J;Zhang G;Chidlow G;Lee WM;Moore HC;Harnett GB;Smith DW;Gern JE;LeSouef PN;Laing IA;Lehmann D View More
22669219 The microbiology of asthma. Nat Rev Microbiol 2012 Edwards MR;Bartlett NW;Hussell T;Openshaw P;Johnston SL View More
22912897 Viral and atypical bacterial etiology of acute respiratory infections in children under 5 years old living in a rural tropical area of Madagascar. PLoS One 2012 Hoffmann J;Rabezanahary H;Randriamarotia M;Ratsimbasoa A;Najjar J;Vernet G;Contamin B;Paranhos-Baccala G View More
23190778 Prospective detection of respiratory pathogens in symptomatic children with cancer. Pediatr Infect Dis J 2013 Srinivasan A;Gu Z;Smith T;Morgenstern M;Sunkara A;Kang G;Srivastava DK;Gaur AH;Leung W;Hayden RT View More
23447038 Detection of multiple viral and bacterial infections in acute exacerbation of chronic obstructive pulmonary disease: a pilot prospective study. J Med Virol 2013 Perotin JM;Dury S;Renois F;Deslee G;Wolak A;Duval V;De Champs C;Lebargy F;Andreoletti L View More
23470677 A prospective study of agents associated with acute respiratory infection among young American Indian children. Pediatr Infect Dis J 2013 Bhat N;Tokarz R;Jain K;Haq S;Weatherholtz R;Chandran A;Karron R;Reid R;Santosham M;O'Brien KL;Lipkin WI View More
24717966 Acute bacterial sinusitis complicating viral upper respiratory tract infection in young children. Pediatr Infect Dis J 2014 Marom T;Alvarez-Fernandez PE;Jennings K;Patel JA;McCormick DP;Chonmaitree T View More
25016709 Microorganisms in respiratory tract of patients diagnosed with atypical pneumonia: results of a research based on the use of reverse transcription polymerase chain reaction (RT-PCR) DNA microarray method and enzyme-linked immunosorbent assay. Clin Lab 2014 Tokman HB;Aslan M;Ortakoylu G;Algingil RC;Yuksel P;Karakullukcu A;Kalayci F;Saribas S;Cakan H;Demir T;Kocazeybek BS View More
25341199 Respiratory viruses and bacteria among pilgrims during the 2013 Hajj. Emerg Infect Dis 2014 Benkouiten S;Charrel R;Belhouchat K;Drali T;Nougairede A;Salez N;Memish ZA;Al Masri M;Fournier PE;Raoult D;Brouqui P;Parola P;Gautret P View More
25549827 Effect of cleaning and disinfection of toys on infectious diseases and micro-organisms in daycare nurseries. J Hosp Infect 2015 Ibfelt T;Engelund EH;Schultz AC;Andersen LP View More
25888024 Identification of viral and bacterial pathogens from hospitalized children with severe acute respiratory illness in Lusaka, Zambia, 2011-2012: a cross-sectional study. BMC Infect Dis 2015 Simusika P;Bateman AC;Theo A;Kwenda G;Mfula C;Chentulo E;Monze M View More
25923426 Bacterial and Respiratory Viral Interactions in the Etiology of Acute Otitis Media in HIV-infected and HIV-uninfected South African Children. Pediatr Infect Dis J 2015 Madhi SA;Govender N;Dayal K;Devadiga R;Van Dyke MK;van Niekerk N;Cutland CL;Adrian PV;Nunes MC View More
26100591 Rhinovirus-C detection in children presenting with acute respiratory infection to hospital in Brazil. J Med Virol 2016 Fawkner-Corbett DW;Khoo SK;Duarte CM;Bezerra PG;Bochkov YA;Gern JE;Le Souef PN;McNamara PS View More
26209405 Pathogen transcriptional profile in nasopharyngeal aspirates of children with acute respiratory tract infection. J Clin Virol 2015 Fukutani KF;Nascimento-Carvalho CM;Van der Gucht W;Wollants E;Khouri R;Dierckx T;Van Ranst M;Houspie L;Bouzas ML;Oliveira JR;Barral A;Van Weyenbergh J;de Oliveira CI View More
26527871 Respiratory infectious phenotypes in acute exacerbation of COPD: an aid to length of stay and COPD Assessment Test. Int J Chron Obstruct Pulmon Dis 2015 Dai MY;Qiao JP;Xu YH;Fei GH View More
27130295 Direct molecular detection of a broad range of bacterial and viral organisms and Streptococcus pneumoniae vaccine serotypes in children with otitis media with effusion. BMC Res Notes 2016 Slinger R;Duval M;Langill J;Bromwich M;MacCormick J;Chan F;Vaccani JP View More
27269963 Epidemiology of community-acquired pneumonia and implications for vaccination of children living in developing and newly industrialized countries: A systematic literature review. Hum Vaccin Immunother 2016 DeAntonio R;Yarzabal JP;Cruz JP;Schmidt JE;Kleijnen J View More
27482806 Viral etiology in adult influenza-like illness/acute respiratory infection and predictivity of C-reactive protein. J Infect Dev Ctries 2016 Cinemre H;Karacer C;Yucel M;Ogutlu A;Cinemre FB;Tamer A;Karabay O View More
27629904 Comparison of NxTAG Respiratory Pathogen Panel and Anyplex II RV16 Tests for Multiplex Detection of Respiratory Pathogens in Hospitalized Children. J Clin Microbiol 2016 Brotons P;Henares D;Latorre I;Cepillo A;Launes C;Munoz-Almagro C View More
27886635 Multiplex PCR reveals that viruses are more frequent than bacteria in children with cystic fibrosis. J Clin Virol 2017 Miro-Canis S;Capilla-Rubio S;Marzo-Checa L;Fontanals-Aymerich D;Sanfeliu-Sala I;Espasa-Soley M;Asensio-de-la-Cruz O View More
29111214 Association of rhinovirus species with common cold and asthma symptoms and bacterial pathogens. J Allergy Clin Immunol 2018 Bashir H;Grindle K;Vrtis R;Vang F;Kang T;Salazar L;Anderson E;Pappas T;Gangnon R;Evans MD;Jackson DJ;Lemanske RF Jr;Bochkov YA;Gern JE View More
29927372 Ecology and diversity in upper respiratory tract microbial population structures from a cross-sectional community swabbing study. J Med Microbiol 2018 Coughtrie AL;Morris DE;Anderson R;Begum N;Cleary DW;Faust SN;Jefferies JM;Kraaijeveld AR;Moore MV;Mullee MA;Roderick PJ;Tuck A;Whittaker RN;Yuen HM;Doncaster CP;Clarke SC View More
30061588 Nasal microbiota clusters associate with inflammatory response, viral load, and symptom severity in experimental rhinovirus challenge. Sci Rep 2018 Lehtinen MJ;Hibberd AA;Mannikko S;Yeung N;Kauko T;Forssten S;Lehtoranta L;Lahtinen SJ;Stahl B;Lyra A;Turner RB View More
30351487 Demographic and seasonal characteristics of respiratory pathogens in neonates and infants aged 0 to 12 months in the Central-East region of Tunisia. J Med Virol 2019 Brini Khalifa I;Hannachi N;Guerrero A;Orth-Holler D;Bhiri S;Bougila J;Boughamoura L;Merchaoui SN;Sboui H;Mahdhaoui N;Schiela B;Laer DH;Boukadida J;Stoiber H View More
30406048 Limited Correlation of Shotgun Metagenomics Following Host Depletion and Routine Diagnostics for Viruses and Bacteria in Low Concentrated Surrogate and Clinical Samples. Front Cell Infect Microbiol 2018 Oechslin CP;Lenz N;Liechti N;Ryter S;Agyeman P;Bruggmann R;Leib SL;Beuret CM View More
30789240 [Virus and Atypical Pathogens Detected in Community-Acquired Lower Respiratory Tract Infection in Infants and Children of Sfax Region, Tunisia]. Bull Soc Pathol Exot 2018 Berrajah LF;Ben Slama KA;Khbou I;Gargouri S;Chtourou A;Znazen A;Kassis M;Yaich S;Hammami A;Hachicha M;Vabret A;Hakim HK View More
31081422 High mortality from viral pneumonia in patients with cancer. Infect Dis (Lond) 2019 Kim YJ;Lee ES;Lee YS View More
31225788 Application of a nucleic acid-based multiplex kit to identify viral and atypical bacterial aetiology of lower respiratory tract infection in hospitalized children. J Med Microbiol 2019 Wen S;Lv F;Chen X;Zhu L;Li H;Lin L;Zhang H View More
31257239 Viral and Atypical Bacterial Respiratory Infections in a University Teaching Hospital. Jpn J Infect Dis 2019 Harun A;Beyza E View More
31600567 Environmental investigation of respiratory pathogens during the Hajj 2016 and 2018. Travel Med Infect Dis 2020 Hoang VT;Sow D;Belhouchat K;Dao TL;Ly TDA;Fenollar F;Yezli S;Alotaibi B;Raoult D;Parola P;Pommier de Santi V;Gautret P View More
31749410 The dynamics and interactions of respiratory pathogen carriage among French pilgrims during the 2018 Hajj. Emerg Microbes Infect 2019 Hoang VT;Dao TL;Ly TDA;Belhouchat K;Chaht KL;Gaudart J;Mrenda BM;Drali T;Yezli S;Alotaibi B;Fournier PE;Raoult D;Parola P;de Santi VP;Gautret P View More
31962220 Inactivation by osmotic dehydration and air drying of Salmonella, Shiga toxin-producing Escherichia coli, Listeria monocytogenes, hepatitis A virus and selected surrogates on blueberries. Int J Food Microbiol 2020 Bai X;Campagnoli M;Butot S;Putallaz T;Michot L;Zuber S View More
32127629 High resolution metagenomic characterization of complex infectomes in paediatric acute respiratory infection. Sci Rep 2020 Li CX;Li W;Zhou J;Zhang B;Feng Y;Xu CP;Lu YY;Holmes EC;Shi M View More
33245014 Reduced rotavirus vaccine efficacy in protein malnourished human-faecal-microbiota-transplanted gnotobiotic pig model is in part attributed to the gut microbiota. Benef Microbes 2020 Srivastava V;Deblais L;Huang HC;Miyazaki A;Kandasamy S;Langel SN;Paim FC;Chepngeno J;Kathayat D;Vlasova AN;Saif LJ;Rajashekara G View More
33546631 Broad range detection of viral and bacterial pathogens in bronchoalveolar lavage fluid of children to identify the cause of lower respiratory tract infections. BMC Infect Dis 2021 Wang H;Gu J;Li X;van der Gaast-de Jongh CE;Wang W;He X;Xu Z;Yang Y;de Groot R;de Jonge MI;Zheng Y View More
33556036 Identification of Pathogens Potentially Associated with Non-Malarial Fever in Children: A Pilot Study in Peri-Urban Dakar, Senegal. Am J Trop Med Hyg 2021 Gildas Boris H;Idrissa D;Marie Louise S;Cheikh T;Mamadou Aliou B;Fatoumata DS;Rebecca G;Raymond B;Diamilatou T;Vincent R;Oumar F;Abdoulaye S;Muriel V View More
33956758 Etiology of Infectious Diseases in Acutely Ill Children at a Pediatric Hospital in Finland. Pediatr Infect Dis J 2021 Poyry H;Raappana A;Kiviniemi M;Pokka T;Honkila M;Paalanne N;Valmari P;Renko M;Tapiainen T View More
34269641 The impact of the SARS-CoV-2 pandemic on the prevalence of respiratory tract pathogens in patients with community-acquired pneumonia in Germany. Emerg Microbes Infect 2021 Dahne T;Bauer W;Essig A;Schaaf B;Spinner CD;Pletz MW;Rohde G;Rupp J;Witzenrath M;Panning M View More
34408158 Etiological and epidemiological features of acute respiratory infections in China. Nat Commun 2021 Li ZJ;Zhang HY;Ren LL;Lu QB;Ren X;Zhang CH;Wang YF;Lin SH;Zhang XA;Li J;Zhao SW;Yi ZG;Chen X;Yang ZS;Meng L;Wang XH;Liu YL;Wang X;Cui AL;Lai SJ;Jiang T;Yuan Y;Shi LS;Liu MY;Zhu YL;Zhang AR;Zhang ZJ;Yang Y;Ward MP;Feng LZ;Jing HQ;Huang LY;Xu WB;Chen Y;Wu JG;Yuan ZH;Li MF;Wang Y;Wang LP;Fang LQ;Liu W;Hay SI;Gao GF;Yang WZ View More
35216039 Prevalence and Clinical Impact of Coinfection in Patients with Coronavirus Disease 2019 in Korea. Viruses 2022 Jeong S;Lee N;Park Y;Kim J;Jeon K;Park MJ;Song W View More