RVdb StrainID | CNS07355 | GenBank Accession | OR220808.1 |
Species | RVC | Sequence Length | 7069 nt |
Serotype | 1 Added by RVdb | Serotype (GenBank) | -N/A- |
Definition | Rhinovirus C isolate HRVC318/China/Kunming/2023/LZG, complete genome | GenBank Submission Date | 2023-09-13 |
Strain Name | HRVC318/China/Kunming/2023/LZG | Sampling Date | 2023-02-23 |
Sampling Country | China | Sampling location | -N/A- |
Isolation Source | in vitro air liquid interface airway epithelial cell innoculation | NCBI Taxon ID | 463676 |
Sequencing Technology | Illumina | Assembly Method | CLC Genomics Workbench v. 23.0.1 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQC023723 | protease 3C | 5088 | 5636 | 0 | 0 | 549 | |
SQC023724 | 1A (VP4) | 573 | 779 | 0 | 0 | 207 | |
SQC023794 | 1B (VP2) | 780 | 1559 | 0 | 0 | 780 | |
SQC023795 | 1C (VP3) | 1563 | 2270 | 0 | 0 | 708 | |
SQC023796 | 1D (VP1) | 2271 | 3113 | 0 | 0 | 843 | |
SQC023797 | 2A (P2-A) | 3114 | 3521 | 0 | 0 | 408 | |
SQC023798 | 2B (P2-B) | 3522 | 3818 | 0 | 0 | 297 | |
SQC023799 | 2C (P2-C) | 3819 | 4796 | 0 | 0 | 978 | |
SQC023800 | 3A (P3-A) | 4797 | 5021 | 0 | 0 | 225 | |
SQC023801 | 3B (VPg) | 5022 | 5087 | 0 | 0 | 66 | |
SQC023802 | 3D | 5637 | 7016 | 0 | 0 | 1380 | |
SQC023803 | protease 3C | 1 | 572 | 1 | 0 | 572 | |
SQC023812 | CDS | 573 | 7019 | 0 | 0 | 6447 | |
SQC023882 | VP4/2 | 573 | 1003 | 0 | 0 | 431 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
37515294 | Rhinovirus Genotypes Circulating in Bulgaria, 2018-2021. | 2023 | Viruses | View More |