| RVdb StrainID | BNZ01316 | GenBank Accession | JN562721.1 |
| Species | RVB | Sequence Length | 6737 nt |
| Serotype | 69 Checked by RVdb | Serotype (GenBank) | 69 |
| Definition | Human rhinovirus B strain HRV-B69_p1020_sR2007_2009 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B69_p1020_sR2007_2009 | Sampling Date | 2009-03-10 |
| Sampling Country | USA | Sampling location | Madison, WI |
| Isolation Source | oronasal secretion [ENVO:02000035] | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet v. 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB007693 | 1A (VP4) | 200 | 406 | 0 | 0 | 207 | |
| SQB007694 | 1B (VP2) | 407 | 1192 | 0 | 0 | 786 | |
| SQB007695 | 1C (VP3) | 1193 | 1900 | 0 | 0 | 708 | |
| SQB007696 | 1D (VP1) | 1901 | 2779 | 0 | 0 | 879 | |
| SQB007697 | 2A (P2-A) | 2780 | 3217 | 0 | 0 | 438 | |
| SQB007698 | 2B (P2-B) | 3218 | 3508 | 0 | 0 | 291 | |
| SQB007699 | 2C (P2-C) | 3509 | 4498 | 0 | 0 | 990 | |
| SQB007700 | 3A (P3-A) | 4499 | 4753 | 0 | 0 | 255 | |
| SQB007701 | 3B (VPg) | 4754 | 4822 | 0 | 0 | 69 | |
| SQB007702 | 3D | 5369 | 6737 | 0 | 1 | 1369 | |
| SQB007703 | CDS | 200 | 6737 | 0 | 1 | 6538 | |
| SQB007704 | protease 3C | 4823 | 5368 | 0 | 0 | 546 | |
| SQB007705 | VP4/2 | 200 | 636 | 0 | 0 | 437 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001175 | protease 3C | 1542 | 1723 | 0 | 0 | 182 | |
| SPB001176 | 3D | 1724 | 2179 | 0 | 1 | 456 | |
| SPB001177 | 3B (VPg) | 1519 | 1541 | 0 | 0 | 23 | |
| SPB001178 | 3A (P3-A) | 1434 | 1518 | 0 | 0 | 85 | |
| SPB001179 | 2C (P2-C) | 1104 | 1433 | 0 | 0 | 330 | |
| SPB001180 | 2B (P2-B) | 1007 | 1103 | 0 | 0 | 97 | |
| SPB001181 | 2A (P2-A) | 861 | 1006 | 0 | 0 | 146 | |
| SPB001182 | 1D (VP1) | 568 | 860 | 0 | 0 | 293 | |
| SPB001183 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB001184 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB001185 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001186 | CDS | 1 | 2179 | 0 | 0 | 2179 | |
| SPB001187 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |