| RVdb StrainID | BNZ01301 | GenBank Accession | JN798588.1 |
| Species | RVB | Sequence Length | 6854 nt |
| Serotype | 84 Checked by RVdb | Serotype (GenBank) | 84 |
| Definition | Human rhinovirus B strain HRV-B84_p1018_sR2590_2008 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B84_p1018_sR2590_2008 | Sampling Date | 2008-09-13 |
| Sampling Country | USA | Sampling location | Madison, WI |
| Isolation Source | oronasal secretion [ENVO:02000035] | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet v. 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB007660 | 1A (VP4) | 314 | 520 | 0 | 0 | 207 | |
| SQB007661 | 1B (VP2) | 521 | 1303 | 0 | 0 | 783 | |
| SQB007662 | 1C (VP3) | 1304 | 2014 | 0 | 0 | 711 | |
| SQB007663 | 1D (VP1) | 2015 | 2875 | 0 | 0 | 861 | |
| SQB007664 | 2A (P2-A) | 2876 | 3316 | 0 | 0 | 441 | |
| SQB007665 | 2B (P2-B) | 3317 | 3607 | 0 | 0 | 291 | |
| SQB007666 | 2C (P2-C) | 3608 | 4597 | 0 | 0 | 990 | |
| SQB007667 | 3A (P3-A) | 4598 | 4852 | 0 | 0 | 255 | |
| SQB007668 | 3B (VPg) | 4853 | 4921 | 0 | 0 | 69 | |
| SQB007669 | 3D | 5468 | 6847 | 0 | 0 | 1380 | |
| SQB007670 | 5'UTR | 1 | 313 | 1 | 0 | 313 | |
| SQB007671 | CDS | 314 | 6850 | 0 | 0 | 6537 | |
| SQB007672 | protease 3C | 4922 | 5467 | 0 | 0 | 546 | |
| SQB007673 | VP4/2 | 314 | 750 | 0 | 0 | 437 | |
| SQB007674 | genome | 1 | 6854 | 1 | 1 | 6854 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001292 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB001293 | 3D | 1719 | 2178 | 0 | 0 | 460 | |
| SPB001294 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB001295 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB001296 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB001297 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB001298 | 2A (P2-A) | 855 | 1001 | 0 | 0 | 147 | |
| SPB001299 | 1D (VP1) | 568 | 854 | 0 | 0 | 287 | |
| SPB001300 | 1C (VP3) | 331 | 567 | 0 | 0 | 237 | |
| SPB001301 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPB001302 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001303 | CDS | 1 | 2178 | 0 | 0 | 2178 | |
| SPB001304 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |