| RVdb StrainID | BNZ01291 | GenBank Accession | JQ245972.1 |
| Species | RVB | Sequence Length | 6233 nt |
| Serotype | 103 Corrected by RVdb | Serotype (GenBank) | 6 |
| Definition | Human rhinovirus B strain HRV-B06_p1159_sR2067_2009 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B06_p1159_sR2067_2009 | Sampling Date | 2009 |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB007632 | 1A (VP4) | 309 | 515 | 0 | 0 | 207 | |
| SQB007633 | 1B (VP2) | 516 | 1301 | 0 | 0 | 786 | |
| SQB007634 | 1C (VP3) | 1302 | 2009 | 0 | 0 | 708 | |
| SQB007635 | 1D (VP1) | 2010 | 2873 | 0 | 0 | 864 | |
| SQB007636 | 2A (P2-A) | 2874 | 3311 | 0 | 0 | 438 | |
| SQB007637 | 2B (P2-B) | 3312 | 3602 | 0 | 0 | 291 | |
| SQB007638 | 2C (P2-C) | 3603 | 4592 | 0 | 0 | 990 | |
| SQB007639 | 3A (P3-A) | 4593 | 4847 | 0 | 0 | 255 | |
| SQB007640 | 3B (VPg) | 4848 | 4916 | 0 | 0 | 69 | |
| SQB007641 | 3D | 5463 | 6233 | 0 | 1 | 771 | |
| SQB007642 | 5'UTR | 1 | 308 | 1 | 0 | 308 | |
| SQB007643 | CDS | 309 | 6233 | 0 | 1 | 5925 | |
| SQB007644 | protease 3C | 4917 | 5462 | 0 | 0 | 546 | |
| SQB007645 | VP4/2 | 309 | 745 | 0 | 0 | 437 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001544 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB001545 | 3D | 1719 | 1975 | 0 | 1 | 257 | |
| SPB001546 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB001547 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB001548 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB001549 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB001550 | 2A (P2-A) | 856 | 1001 | 0 | 0 | 146 | |
| SPB001551 | 1D (VP1) | 568 | 855 | 0 | 0 | 288 | |
| SPB001552 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB001553 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB001554 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001555 | CDS | 1 | 1975 | 0 | 0 | 1975 | |
| SPB001556 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |