| RVdb StrainID | BNZ01276 | GenBank Accession | JQ837717.1 |
| Species | RVB | Sequence Length | 6899 nt |
| Serotype | 103 Corrected by RVdb | Serotype (GenBank) | 6 |
| Definition | Human rhinovirus B strain HRV-B06_p1159_sR2069_2009 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B06_p1159_sR2069_2009 | Sampling Date | 2009 |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB007615 | 1A (VP4) | 340 | 546 | 0 | 0 | 207 | |
| SQB007616 | 1B (VP2) | 547 | 1332 | 0 | 0 | 786 | |
| SQB007617 | 1C (VP3) | 1333 | 2040 | 0 | 0 | 708 | |
| SQB007618 | 1D (VP1) | 2041 | 2904 | 0 | 0 | 864 | |
| SQB007619 | 2A (P2-A) | 2905 | 3342 | 0 | 0 | 438 | |
| SQB007620 | 2B (P2-B) | 3343 | 3633 | 0 | 0 | 291 | |
| SQB007621 | 2C (P2-C) | 3634 | 4623 | 0 | 0 | 990 | |
| SQB007622 | 3A (P3-A) | 4624 | 4878 | 0 | 0 | 255 | |
| SQB007623 | 3B (VPg) | 4879 | 4947 | 0 | 0 | 69 | |
| SQB007624 | 3D | 5494 | 6873 | 0 | 0 | 1380 | |
| SQB007625 | 5'UTR | 1 | 339 | 1 | 0 | 339 | |
| SQB007626 | CDS | 340 | 6876 | 0 | 0 | 6537 | |
| SQB007627 | protease 3C | 4948 | 5493 | 0 | 0 | 546 | |
| SQB007628 | VP4/2 | 340 | 776 | 0 | 0 | 437 | |
| SQB007629 | genome | 1 | 6899 | 1 | 1 | 6899 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001570 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB001571 | 3D | 1719 | 2178 | 0 | 0 | 460 | |
| SPB001572 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB001573 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB001574 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB001575 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB001576 | 2A (P2-A) | 856 | 1001 | 0 | 0 | 146 | |
| SPB001577 | 1D (VP1) | 568 | 855 | 0 | 0 | 288 | |
| SPB001578 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB001579 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB001580 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001581 | CDS | 1 | 2178 | 0 | 0 | 2178 | |
| SPB001582 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |