| RVdb StrainID | BNS01518 | GenBank Accession | FJ445112.1 |
| Species | RVB | Sequence Length | 7212 nt |
| Serotype | 5 Checked by RVdb | Serotype (GenBank) | 5 |
| Definition | Human rhinovirus 5 strain ATCC VR-485, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | ATCC VR-485 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147714 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB006250 | 1A (VP4) | 632 | 838 | 0 | 0 | 207 | |
| SQB006251 | 1B (VP2) | 839 | 1618 | 0 | 0 | 780 | |
| SQB006252 | 1C (VP3) | 1619 | 2326 | 0 | 0 | 708 | |
| SQB006253 | 1D (VP1) | 2327 | 3190 | 0 | 0 | 864 | |
| SQB006254 | 2A (P2-A) | 3191 | 3631 | 0 | 0 | 441 | |
| SQB006255 | 2B (P2-B) | 3632 | 3922 | 0 | 0 | 291 | |
| SQB006256 | 2C (P2-C) | 3923 | 4912 | 0 | 0 | 990 | |
| SQB006257 | 3'UTR | 7166 | 7212 | 0 | 0 | 47 | |
| SQB006258 | 3A (P3-A) | 4913 | 5167 | 0 | 0 | 255 | |
| SQB006259 | 3B (VPg) | 5168 | 5236 | 0 | 0 | 69 | |
| SQB006260 | 3D | 5783 | 7162 | 0 | 0 | 1380 | |
| SQB006261 | 5'UTR | 1 | 631 | 0 | 0 | 631 | |
| SQB006262 | CDS | 632 | 7165 | 0 | 0 | 6534 | |
| SQB006263 | protease 3C | 5237 | 5782 | 0 | 0 | 546 | |
| SQB006264 | VP4/2 | 632 | 1068 | 0 | 0 | 437 | |
| SQB006265 | genome | 1 | 7212 | 0 | 0 | 7212 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB000586 | protease 3C | 1536 | 1717 | 0 | 0 | 182 | |
| SPB000587 | 3D | 1718 | 2177 | 0 | 0 | 460 | |
| SPB000588 | 3B (VPg) | 1513 | 1535 | 0 | 0 | 23 | |
| SPB000589 | 3A (P3-A) | 1428 | 1512 | 0 | 0 | 85 | |
| SPB000590 | 2C (P2-C) | 1098 | 1427 | 0 | 0 | 330 | |
| SPB000591 | 2B (P2-B) | 1001 | 1097 | 0 | 0 | 97 | |
| SPB000592 | 2A (P2-A) | 854 | 1000 | 0 | 0 | 147 | |
| SPB000593 | 1D (VP1) | 566 | 853 | 0 | 0 | 288 | |
| SPB000594 | 1C (VP3) | 330 | 565 | 0 | 0 | 236 | |
| SPB000595 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPB000596 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB000597 | CDS | 1 | 2177 | 0 | 0 | 2177 | |
| SPB000598 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |