RVdb StrainID | BNS01443 | GenBank Accession | GU568096.2 |
Species | RVB | Sequence Length | 7224 nt |
Serotype | 42 Added by RVdb | Serotype (GenBank) | -N/A- |
Definition | Rhinovirus B isolate BCH214, complete genome | GenBank Submission Date | 2022-11-06 |
Strain Name | BCH214 | Sampling Date | 2007-10 |
Sampling Country | China | Sampling location | -N/A- |
Isolation Source | nasopharyngeal aspirates from children | NCBI Taxon ID | 147712 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQB006183 | 1A (VP4) | 634 | 840 | 0 | 0 | 207 | |
SQB006184 | 1B (VP2) | 841 | 1620 | 0 | 0 | 780 | |
SQB006185 | 1C (VP3) | 1621 | 2328 | 0 | 0 | 708 | |
SQB006186 | 1D (VP1) | 2329 | 3192 | 0 | 0 | 864 | |
SQB006187 | 2A (P2-A) | 3193 | 3633 | 0 | 0 | 441 | |
SQB006188 | 2B (P2-B) | 3634 | 3924 | 0 | 0 | 291 | |
SQB006189 | 2C (P2-C) | 3925 | 4914 | 0 | 0 | 990 | |
SQB006190 | 3'UTR | 7168 | 7224 | 0 | 0 | 57 | |
SQB006191 | 3A (P3-A) | 4915 | 5169 | 0 | 0 | 255 | |
SQB006192 | 3B (VPg) | 5170 | 5238 | 0 | 0 | 69 | |
SQB006193 | 3D | 5785 | 7164 | 0 | 0 | 1380 | |
SQB006194 | 5'UTR | 1 | 633 | 0 | 0 | 633 | |
SQB006195 | CDS | 634 | 7167 | 0 | 0 | 6534 | |
SQB006196 | protease 3C | 5239 | 5784 | 0 | 0 | 546 | |
SQB006197 | VP4/2 | 634 | 1070 | 0 | 0 | 437 | |
SQB006198 | genome | 1 | 7224 | 0 | 0 | 7224 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPB000899 | protease 3C | 1536 | 1717 | 0 | 0 | 182 | |
SPB000900 | 3D | 1718 | 2177 | 0 | 0 | 460 | |
SPB000901 | 3B (VPg) | 1513 | 1535 | 0 | 0 | 23 | |
SPB000902 | 3A (P3-A) | 1428 | 1512 | 0 | 0 | 85 | |
SPB000903 | 2C (P2-C) | 1098 | 1427 | 0 | 0 | 330 | |
SPB000904 | 2B (P2-B) | 1001 | 1097 | 0 | 0 | 97 | |
SPB000905 | 2A (P2-A) | 854 | 1000 | 0 | 0 | 147 | |
SPB000906 | 1D (VP1) | 566 | 853 | 0 | 0 | 288 | |
SPB000907 | 1C (VP3) | 330 | 565 | 0 | 0 | 236 | |
SPB000908 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
SPB000909 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPB000910 | CDS | 1 | 2177 | 0 | 0 | 2177 | |
SPB000911 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
20728404 | Human rhinovirus C infections mirror those of human rhinovirus A in children with community-acquired pneumonia. | 2010 | J Clin Virol | View More |