Title | Human rhinovirus C infections mirror those of human rhinovirus A in children with community-acquired pneumonia. | ||
Author | Xiang, Zichun; Gonzalez, Richard; Xie, Zhengde; Xiao, Yan; Liu, Jun; Chen, Lan; Liu, Chunyan; Zhang, Jing; Ren, Lili; Vernet, Guy; Paranhos-Baccala, Glaucia; Shen, Kunling; Jin, Qi; Wang, Jianwei | ||
Journal | J Clin Virol | Publication Year/Month | 2010-Oct |
PMID | 20728404 | PMCID | PMC7185749 |
Affiliation | 1.Christophe Merieux Laboratory, IPB, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, Dongcheng District, Beijing 100730, PR China. |
BACKGROUND: Human rhinoviruses (HRVs) are among the most common causes of community-acquired pneumonia (CAP) in children. However, the differential roles of the three HRV species HRV-A, HRV-B, and HRV-C in pediatric CAP are not fully understood. OBJECTIVE: To determine the distribution of HRV species and their roles in children hospitalized with CAP in Beijing, China. STUDY DESIGN: Nasopharyngeal aspirates were collected between April 2007 and March 2008 from 554 children with a primary diagnosis of CAP. HRVs in the clinical samples were detected by RT-PCR and by sequencing. Infections with other respiratory viruses were identified by PCR. RESULTS: HRVs were detected in 99 patients (17.87%). Among these patients, 51.52% tested positive for HRV-A, 38.38% for HRV-C, and 10.10% for HRV-B. HRVs were detected throughout the study period. The monthly distribution of HRV infections varied with HRV species. Median age, gender, symptoms, severity, and duration of hospitalization for single HRV-C infections were similar to those observed for single HRV-A infections. Co-infections with other respiratory viruses were detected in 57.58% of the HRV-positive children. HRV/RSV dual infections were correlated with a higher frequency of shortness of breath (HRV-A group, P(2 tail)= 0.01; HRV-C group, P(2 tail) = 0.015) and lower median ages (HRV-A group, P(2 tail) = 0.049; HRV-C group, P(2 tail) = 0.009). CONCLUSION: Our study shows that HRV-C strains circulate at a prevalence intermediate between HRV-A and HRV-B. The severity of clinical manifestations for HRV-C is comparable to that for HRV-A in children with CAP. These findings point to an important role of both HRV-A and HRV-C in pediatric CAP.
StrainID | RV Species | Serotype | Length(nt) | Country | Year | Strain Name |
---|---|---|---|---|---|---|
BNS01443 | B | 42 | 7224 | China | 2007 | BCH214 |
UNS02340 | Unclassified | None | 305 | China | 2008 | BCH629 |
UNS02341 | Unclassified | None | 299 | China | 2007 | BCH110 |
UNS02342 | Unclassified | None | 299 | China | 2007 | BCH112 |
UNS02343 | Unclassified | None | 299 | China | 2007 | BCH126 |
UNS02344 | Unclassified | None | 303 | China | 2007 | BCH137 |
UNS02345 | Unclassified | None | 296 | China | 2007 | BCH147 |
UNS02346 | Unclassified | None | 395 | China | 2007 | BCH184 |
UNS02347 | Unclassified | None | 299 | China | 2007 | BCH186 |
UNS02348 | Unclassified | None | 299 | China | 2007 | BCH296 |
UNS02349 | Unclassified | None | 298 | China | 2007 | BCH305 |
UNS02350 | Unclassified | None | 297 | China | 2007 | BCH327 |
UNS02351 | Unclassified | None | 304 | China | 2007 | BCH342 |
UNS02352 | Unclassified | None | 308 | China | 2007 | BCH369 |
UNS02353 | Unclassified | None | 303 | China | 2007 | BCH417 |
UNS02354 | Unclassified | None | 299 | China | 2007 | BCH421 |
UNS02355 | Unclassified | None | 301 | China | 2008 | BCH475 |
UNS02356 | Unclassified | None | 306 | China | 2008 | BCH492 |
UNS02357 | Unclassified | None | 304 | China | 2008 | BCH542 |
UNS02358 | Unclassified | None | 301 | China | 2008 | BCH598 |
UNS02359 | Unclassified | None | 304 | China | 2008 | BCH601 |
UNS02360 | Unclassified | None | 301 | China | 2008 | BCH604 |
UNS02361 | Unclassified | None | 301 | China | 2008 | BCH611 |
UNS02362 | Unclassified | None | 300 | China | 2008 | BCH624 |
UNS02363 | Unclassified | None | 299 | China | 2008 | BCH625 |
UNS02364 | Unclassified | None | 304 | China | 2008 | BCH634 |
UNS02365 | Unclassified | None | 278 | China | 2008 | BCH642 |
UNS02366 | Unclassified | None | 344 | China | 2007 | BCH038 |
UNS02367 | Unclassified | None | 337 | China | 2007 | BCH061 |
UNS02368 | Unclassified | None | 329 | China | 2007 | BCH077 |
UNS02369 | Unclassified | None | 344 | China | 2007 | BCH101 |
UNS02370 | Unclassified | None | 396 | China | 2007 | BCH117 |
UNS02371 | Unclassified | None | 228 | China | 2007 | BCH135 |
UNS02372 | Unclassified | None | 437 | China | 2007 | BCH309 |
UNS02373 | Unclassified | None | 337 | China | 2007 | BCH347 |
UNS02374 | Unclassified | None | 339 | China | 2007 | BCH349 |
UNS02375 | Unclassified | None | 371 | China | 2007 | BCH379 |
UNS02376 | Unclassified | None | 336 | China | 2007 | BCH387 |
UNS02377 | Unclassified | None | 333 | China | 2007 | BCH412 |
UNS02378 | Unclassified | None | 329 | China | 2007 | BCH455 |
UNS02379 | Unclassified | None | 342 | China | 2008 | BCH458 |
UNS02380 | Unclassified | None | 337 | China | 2008 | BCH469 |
UNS02381 | Unclassified | None | 337 | China | 2008 | BCH473 |
UNS02382 | Unclassified | None | 337 | China | 2008 | BCH603 |
UNS02383 | Unclassified | None | 337 | China | 2008 | BCH608 |
UNS02384 | Unclassified | None | 337 | China | 2008 | BCH626 |
UNS02385 | Unclassified | None | 547 | China | 2007 | BCH051 |
UNS02386 | Unclassified | None | 540 | China | 2007 | BCH076 |
UNS02387 | Unclassified | None | 547 | China | 2007 | BCH094 |
UNS02388 | Unclassified | None | 546 | China | 2007 | BCH102 |
UNS02389 | Unclassified | None | 546 | China | 2007 | BCH141 |
UNS02390 | Unclassified | None | 378 | China | 2007 | BCH170 |
UNS02391 | Unclassified | None | 531 | China | 2007 | BCH177 |
UNS02392 | Unclassified | None | 519 | China | 2007 | BCH183 |
UNS02393 | Unclassified | None | 546 | China | 2007 | BCH187 |
UNS02394 | Unclassified | None | 538 | China | 2007 | BCH189 |
UNS02395 | Unclassified | None | 546 | China | 2007 | BCH192 |
UNS02396 | Unclassified | None | 547 | China | 2007 | BCH206 |
UNS02397 | Unclassified | None | 542 | China | 2007 | BCH207 |
UNS02398 | Unclassified | None | 540 | China | 2007 | BCH215 |
UNS02399 | Unclassified | None | 546 | China | 2007 | BCH222 |
UNS02400 | Unclassified | None | 548 | China | 2007 | BCH226 |
UNS02401 | Unclassified | None | 546 | China | 2007 | BCH231 |
UNS02402 | Unclassified | None | 546 | China | 2007 | BCH243 |
UNS02403 | Unclassified | None | 548 | China | 2007 | BCH253 |
UNS02404 | Unclassified | None | 537 | China | 2007 | BCH259 |
UNS02405 | Unclassified | None | 535 | China | 2007 | BCH279 |
UNS02406 | Unclassified | None | 545 | China | 2007 | BCH293 |
UNS02407 | Unclassified | None | 552 | China | 2007 | BCH307 |
UNS02408 | Unclassified | None | 543 | China | 2007 | BCH311 |
UNS02409 | Unclassified | None | 543 | China | 2007 | BCH312 |
UNS02410 | Unclassified | None | 546 | China | 2007 | BCH313 |
UNS02411 | Unclassified | None | 546 | China | 2007 | BCH321 |
UNS02412 | Unclassified | None | 548 | China | 2007 | BCH396 |
UNS02413 | Unclassified | None | 547 | China | 2007 | BCH405 |
UNS02414 | Unclassified | None | 540 | China | 2008 | BCH441 |
UNS02415 | Unclassified | None | 435 | China | 2008 | BCH447 |
UNS02416 | Unclassified | None | 546 | China | 2008 | BCH452 |
UNS02417 | Unclassified | None | 551 | China | 2008 | BCH462 |
UNS02418 | Unclassified | None | 539 | China | 2008 | BCH487 |
UNS02419 | Unclassified | None | 533 | China | 2008 | BCH488 |
UNS02420 | Unclassified | None | 539 | China | 2008 | BCH516 |
UNS02421 | Unclassified | None | 539 | China | 2008 | BCH573 |
UNS02422 | Unclassified | None | 546 | China | 2008 | BCH586 |
UNS02423 | Unclassified | None | 548 | China | 2008 | BCH602 |