| RVdb StrainID | BNS01293 | GenBank Accession | JQ245969.1 |
| Species | RVB | Sequence Length | 6941 nt |
| Serotype | 72 Checked by RVdb | Serotype (GenBank) | 72 |
| Definition | Human rhinovirus B strain HRV-B72_p1069_sR342_2007 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B72_p1069_sR342_2007 | Sampling Date | 2007 |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB005992 | 1A (VP4) | 339 | 545 | 0 | 0 | 207 | |
| SQB005993 | 1B (VP2) | 546 | 1331 | 0 | 0 | 786 | |
| SQB005994 | 1C (VP3) | 1332 | 2039 | 0 | 0 | 708 | |
| SQB005995 | 1D (VP1) | 2040 | 2906 | 0 | 0 | 867 | |
| SQB005996 | 2A (P2-A) | 2907 | 3344 | 0 | 0 | 438 | |
| SQB005997 | 2B (P2-B) | 3345 | 3635 | 0 | 0 | 291 | |
| SQB005998 | 2C (P2-C) | 3636 | 4625 | 0 | 0 | 990 | |
| SQB005999 | 3'UTR | 6879 | 6924 | 0 | 0 | 46 | |
| SQB006000 | 3A (P3-A) | 4626 | 4880 | 0 | 0 | 255 | |
| SQB006001 | 3B (VPg) | 4881 | 4949 | 0 | 0 | 69 | |
| SQB006002 | 3D | 5496 | 6875 | 0 | 0 | 1380 | |
| SQB006003 | 5'UTR | 1 | 338 | 1 | 0 | 338 | |
| SQB006004 | CDS | 339 | 6878 | 0 | 0 | 6540 | |
| SQB006005 | protease 3C | 4950 | 5495 | 0 | 0 | 546 | |
| SQB006006 | VP4/2 | 339 | 775 | 0 | 0 | 437 | |
| SQB006007 | genome | 1 | 6941 | 1 | 0 | 6941 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001518 | protease 3C | 1538 | 1705 | 0 | 1 | 168 | |
| SPB001519 | 3D | 1720 | 2179 | 0 | 0 | 460 | |
| SPB001520 | 3B (VPg) | 1515 | 1537 | 0 | 0 | 23 | |
| SPB001521 | 3A (P3-A) | 1430 | 1514 | 0 | 0 | 85 | |
| SPB001522 | 2C (P2-C) | 1100 | 1429 | 0 | 0 | 330 | |
| SPB001523 | 2B (P2-B) | 1003 | 1099 | 0 | 0 | 97 | |
| SPB001524 | 2A (P2-A) | 857 | 1002 | 0 | 0 | 146 | |
| SPB001525 | 1D (VP1) | 568 | 856 | 0 | 0 | 289 | |
| SPB001526 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB001527 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB001528 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001529 | CDS | 1 | 2179 | 0 | 0 | 2179 | |
| SPB001530 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |