| RVdb StrainID | BNS01278 | GenBank Accession | JQ747745.1 |
| Species | RVB | Sequence Length | 6899 nt |
| Serotype | 6 Checked by RVdb | Serotype (GenBank) | 6 |
| Definition | Human rhinovirus B strain HRV-B06_p1277_s6500_2000 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B06_p1277_s6500_2000 | Sampling Date | 2000 |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet 1.2.01 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB005976 | 1A (VP4) | 426 | 632 | 0 | 0 | 207 | |
| SQB005977 | 1B (VP2) | 633 | 1418 | 0 | 0 | 786 | |
| SQB005978 | 1C (VP3) | 1419 | 2126 | 0 | 0 | 708 | |
| SQB005979 | 1D (VP1) | 2127 | 2996 | 0 | 0 | 870 | |
| SQB005980 | 2A (P2-A) | 2997 | 3434 | 0 | 0 | 438 | |
| SQB005981 | 2B (P2-B) | 3435 | 3725 | 0 | 0 | 291 | |
| SQB005982 | 2C (P2-C) | 3726 | 4715 | 0 | 0 | 990 | |
| SQB005983 | 3A (P3-A) | 4716 | 4970 | 0 | 0 | 255 | |
| SQB005984 | 3B (VPg) | 4971 | 5039 | 0 | 0 | 69 | |
| SQB005985 | 3D | 5586 | 6899 | 0 | 1 | 1314 | |
| SQB005986 | 5'UTR | 1 | 425 | 1 | 0 | 425 | |
| SQB005987 | CDS | 426 | 6899 | 0 | 1 | 6474 | |
| SQB005988 | protease 3C | 5040 | 5585 | 0 | 0 | 546 | |
| SQB005989 | VP4/2 | 426 | 862 | 0 | 0 | 437 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001492 | protease 3C | 1539 | 1720 | 0 | 0 | 182 | |
| SPB001493 | 3D | 1721 | 2158 | 0 | 1 | 438 | |
| SPB001494 | 3B (VPg) | 1516 | 1538 | 0 | 0 | 23 | |
| SPB001495 | 3A (P3-A) | 1431 | 1515 | 0 | 0 | 85 | |
| SPB001496 | 2C (P2-C) | 1101 | 1430 | 0 | 0 | 330 | |
| SPB001497 | 2B (P2-B) | 1004 | 1100 | 0 | 0 | 97 | |
| SPB001498 | 2A (P2-A) | 858 | 1003 | 0 | 0 | 146 | |
| SPB001499 | 1D (VP1) | 568 | 857 | 0 | 0 | 290 | |
| SPB001500 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB001501 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB001502 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001503 | CDS | 1 | 2158 | 0 | 0 | 2158 | |
| SPB001504 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |