| RVdb StrainID | BNP01512 | GenBank Accession | FJ445155.1 |
| Species | RVB | Sequence Length | 7224 nt |
| Serotype | 79 Checked by RVdb | Serotype (GenBank) | 79 |
| Definition | Human rhinovirus 79 strain ATCC VR-1189, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | ATCC VR-1189 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185933 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB004567 | 1A (VP4) | 625 | 831 | 0 | 0 | 207 | |
| SQB004568 | 1B (VP2) | 832 | 1629 | 0 | 0 | 798 | |
| SQB004569 | 1C (VP3) | 1630 | 2337 | 0 | 0 | 708 | |
| SQB004570 | 1D (VP1) | 2338 | 3201 | 0 | 0 | 864 | |
| SQB004571 | 2A (P2-A) | 3202 | 3639 | 0 | 0 | 438 | |
| SQB004572 | 2B (P2-B) | 3640 | 3930 | 0 | 0 | 291 | |
| SQB004573 | 2C (P2-C) | 3931 | 4920 | 0 | 0 | 990 | |
| SQB004574 | 3'UTR | 7174 | 7224 | 0 | 0 | 51 | |
| SQB004575 | 3A (P3-A) | 4921 | 5175 | 0 | 0 | 255 | |
| SQB004576 | 3B (VPg) | 5176 | 5244 | 0 | 0 | 69 | |
| SQB004577 | 3D | 5791 | 7170 | 0 | 0 | 1380 | |
| SQB004578 | 5'UTR | 1 | 624 | 0 | 0 | 624 | |
| SQB004579 | CDS | 625 | 7173 | 0 | 0 | 6549 | |
| SQB004580 | protease 3C | 5245 | 5790 | 0 | 0 | 546 | |
| SQB004581 | VP4/2 | 625 | 1061 | 0 | 0 | 437 | |
| SQB004582 | genome | 1 | 7224 | 0 | 0 | 7224 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB000664 | protease 3C | 1541 | 1722 | 0 | 0 | 182 | |
| SPB000665 | 3D | 1723 | 2182 | 0 | 0 | 460 | |
| SPB000666 | 3B (VPg) | 1518 | 1540 | 0 | 0 | 23 | |
| SPB000667 | 3A (P3-A) | 1433 | 1517 | 0 | 0 | 85 | |
| SPB000668 | 2C (P2-C) | 1103 | 1432 | 0 | 0 | 330 | |
| SPB000669 | 2B (P2-B) | 1006 | 1102 | 0 | 0 | 97 | |
| SPB000670 | 2A (P2-A) | 860 | 1005 | 0 | 0 | 146 | |
| SPB000671 | 1D (VP1) | 572 | 859 | 0 | 0 | 288 | |
| SPB000672 | 1C (VP3) | 336 | 571 | 0 | 0 | 236 | |
| SPB000673 | 1B (VP2) | 70 | 335 | 0 | 0 | 266 | |
| SPB000674 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB000675 | CDS | 1 | 2182 | 0 | 0 | 2182 | |
| SPB000676 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |