| RVdb StrainID | BNP01322 | GenBank Accession | JF781500.1 |
| Species | RVB | Sequence Length | 6920 nt |
| Serotype | 101 Checked by RVdb | Serotype (GenBank) | 101 |
| Definition | Rhinovirus B101 strain HRV-B35_p1156_sR810_2007 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B35_p1156_sR810_2007 | Sampling Date | 2007-09-15 |
| Sampling Country | USA | Sampling location | Madison, WI |
| Isolation Source | oronasal secretion [ENVO:02000035] | NCBI Taxon ID | 2777137 |
| Sequencing Technology | Illumina HiSeq 2000 | Assembly Method | Velvet v. 1.0.13 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB004410 | 1A (VP4) | 319 | 525 | 0 | 0 | 207 | |
| SQB004411 | 1B (VP2) | 526 | 1323 | 0 | 0 | 798 | |
| SQB004412 | 1C (VP3) | 1324 | 2031 | 0 | 0 | 708 | |
| SQB004413 | 1D (VP1) | 2032 | 2895 | 0 | 0 | 864 | |
| SQB004414 | 2A (P2-A) | 2896 | 3333 | 0 | 0 | 438 | |
| SQB004415 | 2B (P2-B) | 3334 | 3624 | 0 | 0 | 291 | |
| SQB004416 | 2C (P2-C) | 3625 | 4614 | 0 | 0 | 990 | |
| SQB004417 | 3'UTR | 6868 | 6915 | 0 | 0 | 48 | |
| SQB004418 | 3A (P3-A) | 4615 | 4869 | 0 | 0 | 255 | |
| SQB004419 | 3B (VPg) | 4870 | 4938 | 0 | 0 | 69 | |
| SQB004420 | 3D | 5485 | 6864 | 0 | 0 | 1380 | |
| SQB004421 | 5'UTR | 1 | 318 | 1 | 0 | 318 | |
| SQB004422 | CDS | 319 | 6867 | 0 | 0 | 6549 | |
| SQB004423 | protease 3C | 4939 | 5484 | 0 | 0 | 546 | |
| SQB004424 | VP4/2 | 319 | 755 | 0 | 0 | 437 | |
| SQB004425 | genome | 1 | 6920 | 1 | 0 | 6920 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001082 | protease 3C | 1541 | 1722 | 0 | 0 | 182 | |
| SPB001083 | 3D | 1723 | 2182 | 0 | 0 | 460 | |
| SPB001084 | 3B (VPg) | 1518 | 1540 | 0 | 0 | 23 | |
| SPB001085 | 3A (P3-A) | 1433 | 1517 | 0 | 0 | 85 | |
| SPB001086 | 2C (P2-C) | 1103 | 1432 | 0 | 0 | 330 | |
| SPB001087 | 2B (P2-B) | 1006 | 1102 | 0 | 0 | 97 | |
| SPB001088 | 2A (P2-A) | 860 | 1005 | 0 | 0 | 146 | |
| SPB001089 | 1D (VP1) | 572 | 859 | 0 | 0 | 288 | |
| SPB001090 | 1C (VP3) | 336 | 571 | 0 | 0 | 236 | |
| SPB001091 | 1B (VP2) | 70 | 335 | 0 | 0 | 266 | |
| SPB001092 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001093 | CDS | 1 | 2182 | 0 | 0 | 2182 | |
| SPB001094 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |