| RVdb StrainID | BNP01297 | GenBank Accession | JN990701.1 |
| Species | RVB | Sequence Length | 6885 nt |
| Serotype | 83 Checked by RVdb | Serotype (GenBank) | 83 |
| Definition | Human rhinovirus B strain HRV-B83_p1077_sR401_2007 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B83_p1077_sR401_2007 | Sampling Date | 2007 |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB004349 | 1A (VP4) | 336 | 542 | 0 | 0 | 207 | |
| SQB004350 | 1B (VP2) | 543 | 1340 | 0 | 0 | 798 | |
| SQB004351 | 1C (VP3) | 1341 | 2048 | 0 | 0 | 708 | |
| SQB004352 | 1D (VP1) | 2049 | 2915 | 0 | 0 | 867 | |
| SQB004353 | 2A (P2-A) | 2916 | 3353 | 0 | 0 | 438 | |
| SQB004354 | 2B (P2-B) | 3354 | 3644 | 0 | 0 | 291 | |
| SQB004355 | 2C (P2-C) | 3645 | 4634 | 0 | 0 | 990 | |
| SQB004356 | 3A (P3-A) | 4635 | 4889 | 0 | 0 | 255 | |
| SQB004357 | 3B (VPg) | 4890 | 4958 | 0 | 0 | 69 | |
| SQB004358 | 3D | 5505 | 6885 | 0 | 1 | 1381 | |
| SQB004359 | 5'UTR | 1 | 335 | 1 | 0 | 335 | |
| SQB004360 | CDS | 336 | 6885 | 0 | 1 | 6550 | |
| SQB004361 | protease 3C | 4959 | 5504 | 0 | 0 | 546 | |
| SQB004362 | VP4/2 | 336 | 772 | 0 | 0 | 437 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001355 | protease 3C | 1542 | 1723 | 0 | 0 | 182 | |
| SPB001356 | 3D | 1724 | 2183 | 0 | 1 | 460 | |
| SPB001357 | 3B (VPg) | 1519 | 1541 | 0 | 0 | 23 | |
| SPB001358 | 3A (P3-A) | 1434 | 1518 | 0 | 0 | 85 | |
| SPB001359 | 2C (P2-C) | 1104 | 1433 | 0 | 0 | 330 | |
| SPB001360 | 2B (P2-B) | 1007 | 1103 | 0 | 0 | 97 | |
| SPB001361 | 2A (P2-A) | 861 | 1006 | 0 | 0 | 146 | |
| SPB001362 | 1D (VP1) | 572 | 860 | 0 | 0 | 289 | |
| SPB001363 | 1C (VP3) | 336 | 571 | 0 | 0 | 236 | |
| SPB001364 | 1B (VP2) | 70 | 335 | 0 | 0 | 266 | |
| SPB001365 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001366 | CDS | 1 | 2183 | 0 | 0 | 2183 | |
| SPB001367 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |