| RVdb StrainID | BNP01292 | GenBank Accession | JQ245970.1 |
| Species | RVB | Sequence Length | 6855 nt |
| Serotype | 69 Checked by RVdb | Serotype (GenBank) | 69 |
| Definition | Human rhinovirus B strain HRV-B69_p1162_sR1549_2009_g1 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B69_p1162_sR1549_2009_g1 | Sampling Date | 2009 |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB004335 | 1A (VP4) | 440 | 646 | 0 | 0 | 207 | |
| SQB004336 | 1B (VP2) | 647 | 1432 | 0 | 0 | 786 | |
| SQB004337 | 1C (VP3) | 1433 | 2140 | 0 | 0 | 708 | |
| SQB004338 | 1D (VP1) | 2141 | 3019 | 0 | 0 | 879 | |
| SQB004339 | 2A (P2-A) | 3020 | 3457 | 0 | 0 | 438 | |
| SQB004340 | 2B (P2-B) | 3458 | 3748 | 0 | 0 | 291 | |
| SQB004341 | 2C (P2-C) | 3749 | 4738 | 0 | 0 | 990 | |
| SQB004342 | 3A (P3-A) | 4739 | 4993 | 0 | 0 | 255 | |
| SQB004343 | 3B (VPg) | 4994 | 5062 | 0 | 0 | 69 | |
| SQB004344 | 3D | 5609 | 6855 | 0 | 1 | 1247 | |
| SQB004345 | 5'UTR | 1 | 439 | 1 | 0 | 439 | |
| SQB004346 | CDS | 440 | 6855 | 0 | 1 | 6416 | |
| SQB004347 | protease 3C | 5063 | 5608 | 0 | 0 | 546 | |
| SQB004348 | VP4/2 | 440 | 876 | 0 | 0 | 437 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001531 | protease 3C | 1542 | 1723 | 0 | 0 | 182 | |
| SPB001532 | 3D | 1724 | 2139 | 0 | 1 | 416 | |
| SPB001533 | 3B (VPg) | 1519 | 1541 | 0 | 0 | 23 | |
| SPB001534 | 3A (P3-A) | 1434 | 1518 | 0 | 0 | 85 | |
| SPB001535 | 2C (P2-C) | 1104 | 1433 | 0 | 0 | 330 | |
| SPB001536 | 2B (P2-B) | 1007 | 1103 | 0 | 0 | 97 | |
| SPB001537 | 2A (P2-A) | 861 | 1006 | 0 | 0 | 146 | |
| SPB001538 | 1D (VP1) | 568 | 860 | 0 | 0 | 293 | |
| SPB001539 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB001540 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB001541 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001542 | CDS | 1 | 2139 | 0 | 0 | 2139 | |
| SPB001543 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |