| RVdb StrainID | BNM01505 | GenBank Accession | FJ445174.1 |
| Species | RVB | Sequence Length | 7208 nt |
| Serotype | 99 Checked by RVdb | Serotype (GenBank) | 99 |
| Definition | Human rhinovirus 99 strain ATCC VR-1299, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | ATCC VR-1299 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185945 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB002899 | 1A (VP4) | 626 | 832 | 0 | 0 | 207 | |
| SQB002900 | 1B (VP2) | 833 | 1612 | 0 | 0 | 780 | |
| SQB002901 | 1C (VP3) | 1613 | 2320 | 0 | 0 | 708 | |
| SQB002902 | 1D (VP1) | 2321 | 3184 | 0 | 0 | 864 | |
| SQB002903 | 2A (P2-A) | 3185 | 3625 | 0 | 0 | 441 | |
| SQB002904 | 2B (P2-B) | 3626 | 3916 | 0 | 0 | 291 | |
| SQB002905 | 2C (P2-C) | 3917 | 4906 | 0 | 0 | 990 | |
| SQB002906 | 3'UTR | 7160 | 7208 | 0 | 0 | 49 | |
| SQB002907 | 3A (P3-A) | 4907 | 5161 | 0 | 0 | 255 | |
| SQB002908 | 3B (VPg) | 5162 | 5230 | 0 | 0 | 69 | |
| SQB002909 | 3D | 5777 | 7156 | 0 | 0 | 1380 | |
| SQB002910 | 5'UTR | 1 | 625 | 0 | 0 | 625 | |
| SQB002911 | CDS | 626 | 7159 | 0 | 0 | 6534 | |
| SQB002912 | protease 3C | 5231 | 5776 | 0 | 0 | 546 | |
| SQB002913 | VP4/2 | 626 | 1062 | 0 | 0 | 437 | |
| SQB002914 | genome | 1 | 7208 | 0 | 0 | 7208 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB000755 | protease 3C | 1536 | 1717 | 0 | 0 | 182 | |
| SPB000756 | 3D | 1718 | 2177 | 0 | 0 | 460 | |
| SPB000757 | 3B (VPg) | 1513 | 1535 | 0 | 0 | 23 | |
| SPB000758 | 3A (P3-A) | 1428 | 1512 | 0 | 0 | 85 | |
| SPB000759 | 2C (P2-C) | 1098 | 1427 | 0 | 0 | 330 | |
| SPB000760 | 2B (P2-B) | 1001 | 1097 | 0 | 0 | 97 | |
| SPB000761 | 2A (P2-A) | 854 | 1000 | 0 | 0 | 147 | |
| SPB000762 | 1D (VP1) | 566 | 853 | 0 | 0 | 288 | |
| SPB000763 | 1C (VP3) | 330 | 565 | 0 | 0 | 236 | |
| SPB000764 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPB000765 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB000766 | CDS | 1 | 2177 | 0 | 0 | 2177 | |
| SPB000767 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |