| RVdb StrainID | BNM01310 | GenBank Accession | JN614997.1 |
| Species | RVB | Sequence Length | 7087 nt |
| Serotype | 72 Checked by RVdb | Serotype (GenBank) | 72 |
| Definition | Human rhinovirus B strain HRV-B72_p1030_sR93_2007 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B72_p1030_sR93_2007 | Sampling Date | 2007-09-29 |
| Sampling Country | USA | Sampling location | Madison, WI |
| Isolation Source | oronasal secretion [ENVO:02000035] | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet v. 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB002736 | 1A (VP4) | 527 | 733 | 0 | 0 | 207 | |
| SQB002737 | 1B (VP2) | 734 | 1519 | 0 | 0 | 786 | |
| SQB002738 | 1C (VP3) | 1520 | 2227 | 0 | 0 | 708 | |
| SQB002739 | 1D (VP1) | 2228 | 3094 | 0 | 0 | 867 | |
| SQB002740 | 2A (P2-A) | 3095 | 3532 | 0 | 0 | 438 | |
| SQB002741 | 2B (P2-B) | 3533 | 3823 | 0 | 0 | 291 | |
| SQB002742 | 2C (P2-C) | 3824 | 4813 | 0 | 0 | 990 | |
| SQB002743 | 3A (P3-A) | 4814 | 5068 | 0 | 0 | 255 | |
| SQB002744 | 3B (VPg) | 5069 | 5137 | 0 | 0 | 69 | |
| SQB002745 | 3D | 5684 | 7063 | 0 | 0 | 1380 | |
| SQB002746 | 5'UTR | 1 | 526 | 1 | 0 | 526 | |
| SQB002747 | CDS | 527 | 7066 | 0 | 0 | 6540 | |
| SQB002748 | protease 3C | 5138 | 5683 | 0 | 0 | 546 | |
| SQB002749 | VP4/2 | 527 | 963 | 0 | 0 | 437 | |
| SQB002750 | genome | 1 | 7087 | 1 | 1 | 7087 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001253 | protease 3C | 1538 | 1719 | 0 | 0 | 182 | |
| SPB001254 | 3D | 1720 | 2179 | 0 | 0 | 460 | |
| SPB001255 | 3B (VPg) | 1515 | 1537 | 0 | 0 | 23 | |
| SPB001256 | 3A (P3-A) | 1430 | 1514 | 0 | 0 | 85 | |
| SPB001257 | 2C (P2-C) | 1100 | 1429 | 0 | 0 | 330 | |
| SPB001258 | 2B (P2-B) | 1003 | 1099 | 0 | 0 | 97 | |
| SPB001259 | 2A (P2-A) | 857 | 1002 | 0 | 0 | 146 | |
| SPB001260 | 1D (VP1) | 568 | 856 | 0 | 0 | 289 | |
| SPB001261 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB001262 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB001263 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001264 | CDS | 1 | 2179 | 0 | 0 | 2179 | |
| SPB001265 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |