| RVdb StrainID | BNM01275 | GenBank Accession | JQ837721.1 |
| Species | RVB | Sequence Length | 6332 nt |
| Serotype | 103 Corrected by RVdb | Serotype (GenBank) | 6 |
| Definition | Human rhinovirus B strain HRV-B06_p1160_sR1154_2009 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B06_p1160_sR1154_2009 | Sampling Date | 2009 |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB002687 | 1A (VP4) | 345 | 551 | 0 | 0 | 207 | |
| SQB002688 | 1B (VP2) | 552 | 1337 | 0 | 0 | 786 | |
| SQB002689 | 1C (VP3) | 1338 | 2045 | 0 | 0 | 708 | |
| SQB002690 | 1D (VP1) | 2046 | 2909 | 0 | 0 | 864 | |
| SQB002691 | 2A (P2-A) | 2910 | 3347 | 0 | 0 | 438 | |
| SQB002692 | 2B (P2-B) | 3348 | 3638 | 0 | 0 | 291 | |
| SQB002693 | 2C (P2-C) | 3639 | 4628 | 0 | 0 | 990 | |
| SQB002694 | 3A (P3-A) | 4629 | 4883 | 0 | 0 | 255 | |
| SQB002695 | 3B (VPg) | 4884 | 4952 | 0 | 0 | 69 | |
| SQB002696 | 3D | 5499 | 6332 | 0 | 1 | 834 | |
| SQB002697 | 5'UTR | 1 | 344 | 1 | 0 | 344 | |
| SQB002698 | CDS | 345 | 6332 | 0 | 1 | 5988 | |
| SQB002699 | protease 3C | 4953 | 5498 | 0 | 0 | 546 | |
| SQB002700 | VP4/2 | 345 | 781 | 0 | 0 | 437 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001583 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB001584 | 3D | 1719 | 1996 | 0 | 1 | 278 | |
| SPB001585 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB001586 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB001587 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB001588 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB001589 | 2A (P2-A) | 856 | 1001 | 0 | 0 | 146 | |
| SPB001590 | 1D (VP1) | 568 | 855 | 0 | 0 | 288 | |
| SPB001591 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB001592 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB001593 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001594 | CDS | 1 | 1996 | 0 | 0 | 1996 | |
| SPB001595 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |