| RVdb StrainID | BNM01270 | GenBank Accession | JQ994497.1 |
| Species | RVB | Sequence Length | 6859 nt |
| Serotype | 103 Corrected by RVdb | Serotype (GenBank) | 6 |
| Definition | Human rhinovirus B strain HRV-B06_p1220_sR1439_2009 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B06_p1220_sR1439_2009 | Sampling Date | 2009 |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB002672 | 1A (VP4) | 311 | 517 | 0 | 0 | 207 | |
| SQB002673 | 1B (VP2) | 518 | 1303 | 0 | 0 | 786 | |
| SQB002674 | 1C (VP3) | 1304 | 2011 | 0 | 0 | 708 | |
| SQB002675 | 1D (VP1) | 2012 | 2875 | 0 | 0 | 864 | |
| SQB002676 | 2A (P2-A) | 2876 | 3313 | 0 | 0 | 438 | |
| SQB002677 | 2B (P2-B) | 3314 | 3604 | 0 | 0 | 291 | |
| SQB002678 | 2C (P2-C) | 3605 | 4594 | 0 | 0 | 990 | |
| SQB002679 | 3A (P3-A) | 4595 | 4849 | 0 | 0 | 255 | |
| SQB002680 | 3B (VPg) | 4850 | 4918 | 0 | 0 | 69 | |
| SQB002681 | 3D | 5465 | 6844 | 0 | 0 | 1380 | |
| SQB002682 | 5'UTR | 1 | 310 | 1 | 0 | 310 | |
| SQB002683 | CDS | 311 | 6847 | 0 | 0 | 6537 | |
| SQB002684 | protease 3C | 4919 | 5464 | 0 | 0 | 546 | |
| SQB002685 | VP4/2 | 311 | 747 | 0 | 0 | 437 | |
| SQB002686 | genome | 1 | 6859 | 1 | 1 | 6859 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001609 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB001610 | 3D | 1719 | 2178 | 0 | 0 | 460 | |
| SPB001611 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB001612 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB001613 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB001614 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB001615 | 2A (P2-A) | 856 | 1001 | 0 | 0 | 146 | |
| SPB001616 | 1D (VP1) | 568 | 855 | 0 | 0 | 288 | |
| SPB001617 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB001618 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB001619 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001620 | CDS | 1 | 2178 | 0 | 0 | 2178 | |
| SPB001621 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |