| RVdb StrainID | BNC01509 | GenBank Accession | FJ445164.1 |
| Species | RVB | Sequence Length | 7213 nt |
| Serotype | 86 Checked by RVdb | Serotype (GenBank) | 86 |
| Definition | Human rhinovirus 86 strain ATCC VR-1196, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | ATCC VR-1196 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185938 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB001357 | 1A (VP4) | 632 | 838 | 0 | 0 | 207 | |
| SQB001358 | 1B (VP2) | 839 | 1624 | 0 | 0 | 786 | |
| SQB001359 | 1C (VP3) | 1625 | 2332 | 0 | 0 | 708 | |
| SQB001360 | 1D (VP1) | 2333 | 3196 | 0 | 0 | 864 | |
| SQB001361 | 2A (P2-A) | 3197 | 3634 | 0 | 0 | 438 | |
| SQB001362 | 2B (P2-B) | 3635 | 3925 | 0 | 0 | 291 | |
| SQB001363 | 2C (P2-C) | 3926 | 4915 | 0 | 0 | 990 | |
| SQB001364 | 3'UTR | 7169 | 7211 | 0 | 0 | 43 | |
| SQB001365 | 3A (P3-A) | 4916 | 5170 | 0 | 0 | 255 | |
| SQB001366 | 3B (VPg) | 5171 | 5239 | 0 | 0 | 69 | |
| SQB001367 | 3D | 5786 | 7165 | 0 | 0 | 1380 | |
| SQB001368 | 5'UTR | 1 | 631 | 0 | 0 | 631 | |
| SQB001369 | CDS | 632 | 7168 | 0 | 0 | 6537 | |
| SQB001370 | protease 3C | 5240 | 5785 | 0 | 0 | 546 | |
| SQB001371 | VP4/2 | 632 | 1068 | 0 | 0 | 437 | |
| SQB001372 | genome | 1 | 7213 | 0 | 0 | 7213 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB000703 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB000704 | 3D | 1719 | 2178 | 0 | 0 | 460 | |
| SPB000705 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB000706 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB000707 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB000708 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB000709 | 2A (P2-A) | 856 | 1001 | 0 | 0 | 146 | |
| SPB000710 | 1D (VP1) | 568 | 855 | 0 | 0 | 288 | |
| SPB000711 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB000712 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB000713 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB000714 | CDS | 1 | 2178 | 0 | 0 | 2178 | |
| SPB000715 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |