| RVdb StrainID | BNC01504 | GenBank Accession | FJ445186.1 |
| Species | RVB | Sequence Length | 7217 nt |
| Serotype | 27 Checked by RVdb | Serotype (GenBank) | 27 |
| Definition | Human rhinovirus 27 strain ATCC VR-1137, complete genome | GenBank Submission Date | 2022-11-06 |
| Strain Name | ATCC VR-1137 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185900 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB001341 | 1A (VP4) | 628 | 834 | 0 | 0 | 207 | |
| SQB001342 | 1B (VP2) | 835 | 1620 | 0 | 0 | 786 | |
| SQB001343 | 1C (VP3) | 1621 | 2328 | 0 | 0 | 708 | |
| SQB001344 | 1D (VP1) | 2329 | 3189 | 0 | 0 | 861 | |
| SQB001345 | 2A (P2-A) | 3190 | 3630 | 0 | 0 | 441 | |
| SQB001346 | 2B (P2-B) | 3631 | 3921 | 0 | 0 | 291 | |
| SQB001347 | 2C (P2-C) | 3922 | 4911 | 0 | 0 | 990 | |
| SQB001348 | 3'UTR | 7165 | 7217 | 0 | 0 | 53 | |
| SQB001349 | 3A (P3-A) | 4912 | 5166 | 0 | 0 | 255 | |
| SQB001350 | 3B (VPg) | 5167 | 5235 | 0 | 0 | 69 | |
| SQB001351 | 3D | 5782 | 7161 | 0 | 0 | 1380 | |
| SQB001352 | 5'UTR | 1 | 627 | 0 | 0 | 627 | |
| SQB001353 | CDS | 628 | 7164 | 0 | 0 | 6537 | |
| SQB001354 | protease 3C | 5236 | 5781 | 0 | 0 | 546 | |
| SQB001355 | VP4/2 | 628 | 1064 | 0 | 0 | 437 | |
| SQB001356 | genome | 1 | 7217 | 0 | 0 | 7217 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB000768 | protease 3C | 1537 | 1718 | 0 | 0 | 182 | |
| SPB000769 | 3D | 1719 | 2178 | 0 | 0 | 460 | |
| SPB000770 | 3B (VPg) | 1514 | 1536 | 0 | 0 | 23 | |
| SPB000771 | 3A (P3-A) | 1429 | 1513 | 0 | 0 | 85 | |
| SPB000772 | 2C (P2-C) | 1099 | 1428 | 0 | 0 | 330 | |
| SPB000773 | 2B (P2-B) | 1002 | 1098 | 0 | 0 | 97 | |
| SPB000774 | 2A (P2-A) | 855 | 1001 | 0 | 0 | 147 | |
| SPB000775 | 1D (VP1) | 568 | 854 | 0 | 0 | 287 | |
| SPB000776 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB000777 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB000778 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB000779 | CDS | 1 | 2178 | 0 | 0 | 2178 | |
| SPB000780 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |