| RVdb StrainID | BNC01304 | GenBank Accession | JN798562.2 |
| Species | RVB | Sequence Length | 6984 nt |
| Serotype | 72 Checked by RVdb | Serotype (GenBank) | 72 |
| Definition | Human rhinovirus B strain HRV-B72_p1051_sR207_2007 polyprotein gene, partial cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B72_p1051_sR207_2007 | Sampling Date | 2007-09-29 |
| Sampling Country | USA | Sampling location | Madison, WI |
| Isolation Source | oronasal secretion [ENVO:02000035] | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet v. 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB001166 | 1A (VP4) | 451 | 660 | 0 | 0 | 210 | |
| SQB001167 | 1B (VP2) | 661 | 1443 | 0 | 0 | 783 | |
| SQB001168 | 1C (VP3) | 1444 | 2151 | 0 | 0 | 708 | |
| SQB001169 | 1D (VP1) | 2152 | 3018 | 0 | 0 | 867 | |
| SQB001170 | 2A (P2-A) | 3019 | 3456 | 0 | 0 | 438 | |
| SQB001171 | 2B (P2-B) | 3457 | 3747 | 0 | 0 | 291 | |
| SQB001172 | 2C (P2-C) | 3748 | 4737 | 0 | 0 | 990 | |
| SQB001173 | 3A (P3-A) | 4738 | 4992 | 0 | 0 | 255 | |
| SQB001174 | 3B (VPg) | 4993 | 5061 | 0 | 0 | 69 | |
| SQB001175 | 3D | 5608 | 6984 | 0 | 1 | 1377 | |
| SQB001176 | 5'UTR | 1 | 450 | 1 | 0 | 450 | |
| SQB001177 | CDS | 451 | 6984 | 0 | 1 | 6534 | |
| SQB001178 | protease 3C | 5062 | 5607 | 0 | 0 | 546 | |
| SQB001179 | VP4/2 | 451 | 887 | 0 | 0 | 437 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001329 | protease 3C | 1538 | 1719 | 0 | 0 | 182 | |
| SPB001330 | 3D | 1720 | 2178 | 0 | 1 | 459 | |
| SPB001331 | 3B (VPg) | 1515 | 1537 | 0 | 0 | 23 | |
| SPB001332 | 3A (P3-A) | 1430 | 1514 | 0 | 0 | 85 | |
| SPB001333 | 2C (P2-C) | 1100 | 1429 | 0 | 0 | 330 | |
| SPB001334 | 2B (P2-B) | 1003 | 1099 | 0 | 0 | 97 | |
| SPB001335 | 2A (P2-A) | 857 | 1002 | 0 | 0 | 146 | |
| SPB001336 | 1D (VP1) | 568 | 856 | 0 | 0 | 289 | |
| SPB001337 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB001338 | 1B (VP2) | 105 | 331 | 1 | 0 | 227 | |
| SPB001339 | 1A (VP4) | 1 | 70 | 0 | 0 | 70 | |
| SPB001340 | CDS | 1 | 2178 | 0 | 0 | 2178 | |
| SPB001341 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |