| RVdb StrainID | BNC01264 | GenBank Accession | JX193795.1 |
| Species | RVB | Sequence Length | 6822 nt |
| Serotype | 6 Checked by RVdb | Serotype (GenBank) | 6 |
| Definition | Human rhinovirus B strain HRV-B06_p011_sT0384_2007 polyprotein gene, complete cds | GenBank Submission Date | 2022-11-03 |
| Strain Name | HRV-B06_p011_sT0384_2007 | Sampling Date | 2007 |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147712 |
| Sequencing Technology | Illumina | Assembly Method | Velvet 1.2.01 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQB001104 | 1A (VP4) | 243 | 449 | 0 | 0 | 207 | |
| SQB001105 | 1B (VP2) | 450 | 1235 | 0 | 0 | 786 | |
| SQB001106 | 1C (VP3) | 1236 | 1943 | 0 | 0 | 708 | |
| SQB001107 | 1D (VP1) | 1944 | 2813 | 0 | 0 | 870 | |
| SQB001108 | 2A (P2-A) | 2814 | 3251 | 0 | 0 | 438 | |
| SQB001109 | 2B (P2-B) | 3252 | 3542 | 0 | 0 | 291 | |
| SQB001110 | 2C (P2-C) | 3543 | 4532 | 0 | 0 | 990 | |
| SQB001111 | 3'UTR | 6786 | 6822 | 0 | 1 | 37 | |
| SQB001112 | 3A (P3-A) | 4533 | 4787 | 0 | 0 | 255 | |
| SQB001113 | 3B (VPg) | 4788 | 4856 | 0 | 0 | 69 | |
| SQB001114 | 3D | 5403 | 6782 | 0 | 0 | 1380 | |
| SQB001115 | 5'UTR | 1 | 242 | 1 | 0 | 242 | |
| SQB001116 | CDS | 243 | 6785 | 0 | 0 | 6543 | |
| SQB001117 | protease 3C | 4857 | 5402 | 0 | 0 | 546 | |
| SQB001118 | VP4/2 | 243 | 679 | 0 | 0 | 437 | |
| SQB001119 | genome | 1 | 6822 | 1 | 1 | 6822 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPB001673 | protease 3C | 1539 | 1720 | 0 | 0 | 182 | |
| SPB001674 | 3D | 1721 | 2180 | 0 | 0 | 460 | |
| SPB001675 | 3B (VPg) | 1516 | 1538 | 0 | 0 | 23 | |
| SPB001676 | 3A (P3-A) | 1431 | 1515 | 0 | 0 | 85 | |
| SPB001677 | 2C (P2-C) | 1101 | 1430 | 0 | 0 | 330 | |
| SPB001678 | 2B (P2-B) | 1004 | 1100 | 0 | 0 | 97 | |
| SPB001679 | 2A (P2-A) | 858 | 1003 | 0 | 0 | 146 | |
| SPB001680 | 1D (VP1) | 568 | 857 | 0 | 0 | 290 | |
| SPB001681 | 1C (VP3) | 332 | 567 | 0 | 0 | 236 | |
| SPB001682 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPB001683 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPB001684 | CDS | 1 | 2180 | 0 | 0 | 2180 | |
| SPB001685 | VP4/2 | 1 | 145 | 0 | 0 | 145 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675857 | Genome sequences of rhinovirus B isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |