| RVdb StrainID | ANZ07961 | GenBank Accession | FJ445114.1 |
| Species | RVA | Sequence Length | 7134 nt |
| Serotype | 9 Checked by RVdb | Serotype (GenBank) | 9 |
| Definition | Human rhinovirus 9 isolate F01, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | F01 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185891 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA038379 | 1A (VP4) | 614 | 820 | 0 | 0 | 207 | |
| SQA038380 | 1B (VP2) | 821 | 1606 | 0 | 0 | 786 | |
| SQA038381 | 1C (VP3) | 1607 | 2320 | 0 | 0 | 714 | |
| SQA038382 | 1D (VP1) | 2321 | 3187 | 0 | 0 | 867 | |
| SQA038383 | 2A (P2-A) | 3188 | 3613 | 0 | 0 | 426 | |
| SQA038384 | 2B (P2-B) | 3614 | 3898 | 0 | 0 | 285 | |
| SQA038385 | 2C (P2-C) | 3899 | 4864 | 0 | 0 | 966 | |
| SQA038386 | 3'UTR | 7091 | 7134 | 0 | 0 | 44 | |
| SQA038387 | 3A (P3-A) | 4865 | 5095 | 0 | 0 | 231 | |
| SQA038388 | 3B (VPg) | 5096 | 5158 | 0 | 0 | 63 | |
| SQA038389 | protease 3C | 5159 | 5707 | 0 | 0 | 549 | |
| SQA038390 | 3D | 5708 | 7087 | 0 | 0 | 1380 | |
| SQA038391 | 5'UTR | 1 | 613 | 0 | 0 | 613 | |
| SQA038392 | CDS | 614 | 7090 | 0 | 0 | 6477 | |
| SQA038393 | VP4/2 | 614 | 1048 | 0 | 0 | 435 | |
| SQA038394 | genome | 1 | 7134 | 0 | 0 | 7134 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001139 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA001140 | 3D | 1699 | 2158 | 0 | 0 | 460 | |
| SPA001141 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA001142 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA001143 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA001144 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA001145 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA001146 | 1D (VP1) | 570 | 858 | 0 | 0 | 289 | |
| SPA001147 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA001148 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA001149 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001150 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001151 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |