| RVdb StrainID | ANZ07951 | GenBank Accession | FJ445125.1 |
| Species | RVA | Sequence Length | 7123 nt |
| Serotype | 29 Checked by RVdb | Serotype (GenBank) | 29 |
| Definition | Human rhinovirus 29 strain ATCC VR-1139, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1139 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 44129 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA038347 | 1A (VP4) | 613 | 819 | 0 | 0 | 207 | |
| SQA038348 | 1B (VP2) | 820 | 1617 | 0 | 0 | 798 | |
| SQA038349 | 1C (VP3) | 1618 | 2331 | 0 | 0 | 714 | |
| SQA038350 | 1D (VP1) | 2332 | 3174 | 0 | 0 | 843 | |
| SQA038351 | 2A (P2-A) | 3175 | 3600 | 0 | 0 | 426 | |
| SQA038352 | 2B (P2-B) | 3601 | 3885 | 0 | 0 | 285 | |
| SQA038353 | 2C (P2-C) | 3886 | 4851 | 0 | 0 | 966 | |
| SQA038354 | 3'UTR | 7078 | 7123 | 0 | 0 | 46 | |
| SQA038355 | 3A (P3-A) | 4852 | 5082 | 0 | 0 | 231 | |
| SQA038356 | 3B (VPg) | 5083 | 5145 | 0 | 0 | 63 | |
| SQA038357 | protease 3C | 5146 | 5694 | 0 | 0 | 549 | |
| SQA038358 | 3D | 5695 | 7074 | 0 | 0 | 1380 | |
| SQA038359 | 5'UTR | 1 | 612 | 0 | 0 | 612 | |
| SQA038360 | CDS | 613 | 7077 | 0 | 0 | 6465 | |
| SQA038361 | VP4/2 | 613 | 1047 | 0 | 0 | 435 | |
| SQA038362 | genome | 1 | 7123 | 0 | 0 | 7123 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001269 | protease 3C | 1512 | 1694 | 0 | 0 | 183 | |
| SPA001270 | 3D | 1695 | 2154 | 0 | 0 | 460 | |
| SPA001271 | 3B (VPg) | 1491 | 1511 | 0 | 0 | 21 | |
| SPA001272 | 3A (P3-A) | 1414 | 1490 | 0 | 0 | 77 | |
| SPA001273 | 2C (P2-C) | 1092 | 1413 | 0 | 0 | 322 | |
| SPA001274 | 2B (P2-B) | 997 | 1091 | 0 | 0 | 95 | |
| SPA001275 | 2A (P2-A) | 855 | 996 | 0 | 0 | 142 | |
| SPA001276 | 1D (VP1) | 574 | 854 | 0 | 0 | 281 | |
| SPA001277 | 1C (VP3) | 336 | 573 | 0 | 0 | 238 | |
| SPA001278 | 1B (VP2) | 70 | 335 | 0 | 0 | 266 | |
| SPA001279 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001280 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001281 | CDS | 1 | 2154 | 0 | 0 | 2154 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |