| RVdb StrainID | ANZ07946 | GenBank Accession | FJ445131.1 |
| Species | RVA | Sequence Length | 7129 nt |
| Serotype | 43 Checked by RVdb | Serotype (GenBank) | 43 |
| Definition | Human rhinovirus 43 strain ATCC VR-1153, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1153 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 167321 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA038331 | 1A (VP4) | 614 | 820 | 0 | 0 | 207 | |
| SQA038332 | 1B (VP2) | 821 | 1606 | 0 | 0 | 786 | |
| SQA038333 | 1C (VP3) | 1607 | 2320 | 0 | 0 | 714 | |
| SQA038334 | 1D (VP1) | 2321 | 3187 | 0 | 0 | 867 | |
| SQA038335 | 2A (P2-A) | 3188 | 3613 | 0 | 0 | 426 | |
| SQA038336 | 2B (P2-B) | 3614 | 3898 | 0 | 0 | 285 | |
| SQA038337 | 2C (P2-C) | 3899 | 4864 | 0 | 0 | 966 | |
| SQA038338 | 3'UTR | 7091 | 7129 | 0 | 0 | 39 | |
| SQA038339 | 3A (P3-A) | 4865 | 5095 | 0 | 0 | 231 | |
| SQA038340 | 3B (VPg) | 5096 | 5158 | 0 | 0 | 63 | |
| SQA038341 | protease 3C | 5159 | 5707 | 0 | 0 | 549 | |
| SQA038342 | 3D | 5708 | 7087 | 0 | 0 | 1380 | |
| SQA038343 | 5'UTR | 1 | 613 | 0 | 0 | 613 | |
| SQA038344 | CDS | 614 | 7090 | 0 | 0 | 6477 | |
| SQA038345 | VP4/2 | 614 | 1048 | 0 | 0 | 435 | |
| SQA038346 | genome | 1 | 7129 | 0 | 0 | 7129 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001334 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA001335 | 3D | 1699 | 2158 | 0 | 0 | 460 | |
| SPA001336 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA001337 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA001338 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA001339 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA001340 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA001341 | 1D (VP1) | 570 | 858 | 0 | 0 | 289 | |
| SPA001342 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA001343 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA001344 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001345 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001346 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |