| RVdb StrainID | ANZ07941 | GenBank Accession | FJ445136.1 |
| Species | RVA | Sequence Length | 7152 nt |
| Serotype | 51 Checked by RVdb | Serotype (GenBank) | 51 |
| Definition | Human rhinovirus 51 strain ATCC VR-1161, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1161 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185912 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA038315 | 1A (VP4) | 614 | 820 | 0 | 0 | 207 | |
| SQA038316 | 1B (VP2) | 821 | 1606 | 0 | 0 | 786 | |
| SQA038317 | 1C (VP3) | 1607 | 2320 | 0 | 0 | 714 | |
| SQA038318 | 1D (VP1) | 2321 | 3208 | 0 | 0 | 888 | |
| SQA038319 | 2A (P2-A) | 3209 | 3637 | 0 | 0 | 429 | |
| SQA038320 | 2B (P2-B) | 3638 | 3922 | 0 | 0 | 285 | |
| SQA038321 | 2C (P2-C) | 3923 | 4885 | 0 | 0 | 963 | |
| SQA038322 | 3'UTR | 7112 | 7152 | 0 | 0 | 41 | |
| SQA038323 | 3A (P3-A) | 4886 | 5119 | 0 | 0 | 234 | |
| SQA038324 | 3B (VPg) | 5120 | 5182 | 0 | 0 | 63 | |
| SQA038325 | protease 3C | 5183 | 5731 | 0 | 0 | 549 | |
| SQA038326 | 3D | 5732 | 7108 | 0 | 0 | 1377 | |
| SQA038327 | 5'UTR | 1 | 613 | 0 | 0 | 613 | |
| SQA038328 | CDS | 614 | 7111 | 0 | 0 | 6498 | |
| SQA038329 | VP4/2 | 614 | 1048 | 0 | 0 | 435 | |
| SQA038330 | genome | 1 | 7152 | 0 | 0 | 7152 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001399 | protease 3C | 1524 | 1706 | 0 | 0 | 183 | |
| SPA001400 | 3D | 1707 | 2165 | 0 | 0 | 459 | |
| SPA001401 | 3B (VPg) | 1503 | 1523 | 0 | 0 | 21 | |
| SPA001402 | 3A (P3-A) | 1425 | 1502 | 0 | 0 | 78 | |
| SPA001403 | 2C (P2-C) | 1104 | 1424 | 0 | 0 | 321 | |
| SPA001404 | 2B (P2-B) | 1009 | 1103 | 0 | 0 | 95 | |
| SPA001405 | 2A (P2-A) | 866 | 1008 | 0 | 0 | 143 | |
| SPA001406 | 1D (VP1) | 570 | 865 | 0 | 0 | 296 | |
| SPA001407 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA001408 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA001409 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001410 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001411 | CDS | 1 | 2165 | 0 | 0 | 2165 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |