| RVdb StrainID | ANZ07936 | GenBank Accession | FJ445142.1 |
| Species | RVA | Sequence Length | 7140 nt |
| Serotype | 58 Checked by RVdb | Serotype (GenBank) | 58 |
| Definition | Human rhinovirus 58 strain ATCC VR-1168, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1168 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 44133 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA038299 | 1A (VP4) | 619 | 825 | 0 | 0 | 207 | |
| SQA038300 | 1B (VP2) | 826 | 1620 | 0 | 0 | 795 | |
| SQA038301 | 1C (VP3) | 1621 | 2334 | 0 | 0 | 714 | |
| SQA038302 | 1D (VP1) | 2335 | 3204 | 0 | 0 | 870 | |
| SQA038303 | 2A (P2-A) | 3205 | 3630 | 0 | 0 | 426 | |
| SQA038304 | 2B (P2-B) | 3631 | 3915 | 0 | 0 | 285 | |
| SQA038305 | 2C (P2-C) | 3916 | 4878 | 0 | 0 | 963 | |
| SQA038306 | 3'UTR | 7102 | 7140 | 0 | 0 | 39 | |
| SQA038307 | 3A (P3-A) | 4879 | 5106 | 0 | 0 | 228 | |
| SQA038308 | 3B (VPg) | 5107 | 5169 | 0 | 0 | 63 | |
| SQA038309 | protease 3C | 5170 | 5718 | 0 | 0 | 549 | |
| SQA038310 | 3D | 5719 | 7098 | 0 | 0 | 1380 | |
| SQA038311 | 5'UTR | 1 | 618 | 0 | 0 | 618 | |
| SQA038312 | CDS | 619 | 7101 | 0 | 0 | 6483 | |
| SQA038313 | VP4/2 | 619 | 1053 | 0 | 0 | 435 | |
| SQA038314 | genome | 1 | 7140 | 0 | 0 | 7140 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001464 | protease 3C | 1518 | 1700 | 0 | 0 | 183 | |
| SPA001465 | 3D | 1701 | 2160 | 0 | 0 | 460 | |
| SPA001466 | 3B (VPg) | 1497 | 1517 | 0 | 0 | 21 | |
| SPA001467 | 3A (P3-A) | 1421 | 1496 | 0 | 0 | 76 | |
| SPA001468 | 2C (P2-C) | 1100 | 1420 | 0 | 0 | 321 | |
| SPA001469 | 2B (P2-B) | 1005 | 1099 | 0 | 0 | 95 | |
| SPA001470 | 2A (P2-A) | 863 | 1004 | 0 | 0 | 142 | |
| SPA001471 | 1D (VP1) | 573 | 862 | 0 | 0 | 290 | |
| SPA001472 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA001473 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA001474 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001475 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001476 | CDS | 1 | 2160 | 0 | 0 | 2160 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |