| RVdb StrainID | ANZ07931 | GenBank Accession | FJ445147.1 |
| Species | RVA | Sequence Length | 7162 nt |
| Serotype | 65 Checked by RVdb | Serotype (GenBank) | 65 |
| Definition | Human rhinovirus 65 strain ATCC VR-1175, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1175 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 44135 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA038283 | 1A (VP4) | 624 | 830 | 0 | 0 | 207 | |
| SQA038284 | 1B (VP2) | 831 | 1616 | 0 | 0 | 786 | |
| SQA038285 | 1C (VP3) | 1617 | 2330 | 0 | 0 | 714 | |
| SQA038286 | 1D (VP1) | 2331 | 3218 | 0 | 0 | 888 | |
| SQA038287 | 2A (P2-A) | 3219 | 3647 | 0 | 0 | 429 | |
| SQA038288 | 2B (P2-B) | 3648 | 3932 | 0 | 0 | 285 | |
| SQA038289 | 2C (P2-C) | 3933 | 4895 | 0 | 0 | 963 | |
| SQA038290 | 3'UTR | 7122 | 7162 | 0 | 0 | 41 | |
| SQA038291 | 3A (P3-A) | 4896 | 5129 | 0 | 0 | 234 | |
| SQA038292 | 3B (VPg) | 5130 | 5192 | 0 | 0 | 63 | |
| SQA038293 | protease 3C | 5193 | 5741 | 0 | 0 | 549 | |
| SQA038294 | 3D | 5742 | 7118 | 0 | 0 | 1377 | |
| SQA038295 | 5'UTR | 1 | 623 | 0 | 0 | 623 | |
| SQA038296 | CDS | 624 | 7121 | 0 | 0 | 6498 | |
| SQA038297 | VP4/2 | 624 | 1058 | 0 | 0 | 435 | |
| SQA038298 | genome | 1 | 7162 | 0 | 0 | 7162 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001529 | protease 3C | 1524 | 1706 | 0 | 0 | 183 | |
| SPA001530 | 3D | 1707 | 2165 | 0 | 0 | 459 | |
| SPA001531 | 3B (VPg) | 1503 | 1523 | 0 | 0 | 21 | |
| SPA001532 | 3A (P3-A) | 1425 | 1502 | 0 | 0 | 78 | |
| SPA001533 | 2C (P2-C) | 1104 | 1424 | 0 | 0 | 321 | |
| SPA001534 | 2B (P2-B) | 1009 | 1103 | 0 | 0 | 95 | |
| SPA001535 | 2A (P2-A) | 866 | 1008 | 0 | 0 | 143 | |
| SPA001536 | 1D (VP1) | 570 | 865 | 0 | 0 | 296 | |
| SPA001537 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA001538 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA001539 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001540 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001541 | CDS | 1 | 2165 | 0 | 0 | 2165 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |