| RVdb StrainID | ANZ07236 | GenBank Accession | JF781510.1 |
| Species | RVA | Sequence Length | 6636 nt |
| Serotype | 34 Checked by RVdb | Serotype (GenBank) | 34 |
| Definition | Human rhinovirus A strain HRV-A34_p1058_sR264_2008 polyprotein gene, partial cds | GenBank Submission Date | 2017-01-25 |
| Strain Name | HRV-A34_p1058_sR264_2008 | Sampling Date | 2008-03-05 |
| Sampling Country | USA | Sampling location | Madison, WI |
| Isolation Source | oronasal secretion [ENVO:02000035] | NCBI Taxon ID | 147711 |
| Sequencing Technology | Illumina HiSeq 2000 | Assembly Method | Velvet v. 1.0.13 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA037806 | 1A (VP4) | 190 | 396 | 0 | 0 | 207 | |
| SQA037807 | 1B (VP2) | 397 | 1173 | 0 | 0 | 777 | |
| SQA037808 | 1C (VP3) | 1174 | 1887 | 0 | 0 | 714 | |
| SQA037809 | 1D (VP1) | 1888 | 2640 | 0 | 1 | 753 | |
| SQA037810 | 2A (P2-A) | 3079 | 3174 | 1 | 0 | 96 | |
| SQA037811 | 2B (P2-B) | 3175 | 3459 | 0 | 0 | 285 | |
| SQA037812 | 2C (P2-C) | 3460 | 4425 | 0 | 0 | 966 | |
| SQA037813 | 3A (P3-A) | 4426 | 4656 | 0 | 0 | 231 | |
| SQA037814 | 3B (VPg) | 4657 | 4719 | 0 | 0 | 63 | |
| SQA037815 | protease 3C | 4720 | 5268 | 0 | 0 | 549 | |
| SQA037816 | 3D | 5269 | 6636 | 0 | 1 | 1368 | |
| SQA037817 | CDS | 190 | 6636 | 0 | 1 | 6447 | |
| SQA037818 | VP4/2 | 190 | 624 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPX004947 | CDS | 1 | 2149 | 0 | 0 | 2149 | |
| SPX004984 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPX005051 | 3D | 1694 | 2149 | 0 | 1 | 456 | |
| SPX005052 | 2C (P2-C) | 1091 | 1412 | 0 | 0 | 322 | |
| SPX005053 | 1B (VP2) | 70 | 328 | 0 | 0 | 259 | |
| SPX005054 | 1D (VP1) | 567 | 817 | 0 | 1 | 251 | |
| SPX005055 | 1C (VP3) | 329 | 566 | 0 | 0 | 238 | |
| SPX005056 | protease 3C | 1511 | 1693 | 0 | 0 | 183 | |
| SPX005057 | 2B (P2-B) | 996 | 1090 | 0 | 0 | 95 | |
| SPX005058 | 3A (P3-A) | 1413 | 1489 | 0 | 0 | 77 | |
| SPX005059 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPX005060 | 2A (P2-A) | 964 | 995 | 1 | 0 | 32 | |
| SPX005061 | 3B (VPg) | 1490 | 1510 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675855 | Genome sequences of rhinovirus a isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |