| RVdb StrainID | ANZ06796 | GenBank Accession | JX074055.1 |
| Species | RVA | Sequence Length | 6518 nt |
| Serotype | 76 Checked by RVdb | Serotype (GenBank) | 76 |
| Definition | Human rhinovirus A strain HRV-A76_p1194_sR843_2008 polyprotein gene, partial cds | GenBank Submission Date | 2017-01-25 |
| Strain Name | HRV-A76_p1194_sR843_2008 | Sampling Date | 2008 |
| Sampling Country | USA | Sampling location | Madison, WI |
| Isolation Source | -N/A- | NCBI Taxon ID | 147711 |
| Sequencing Technology | Illumina | Assembly Method | Velvet 1.1.01 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA037379 | 1A (VP4) | 215 | 421 | 0 | 0 | 207 | |
| SQA037380 | 1B (VP2) | 422 | 1207 | 0 | 0 | 786 | |
| SQA037381 | 1C (VP3) | 1208 | 1921 | 0 | 0 | 714 | |
| SQA037382 | 1D (VP1) | 1922 | 2779 | 0 | 0 | 858 | |
| SQA037383 | 2A (P2-A) | 2780 | 3205 | 0 | 0 | 426 | |
| SQA037384 | 2B (P2-B) | 3206 | 3490 | 0 | 0 | 285 | |
| SQA037385 | 2C (P2-C) | 3491 | 4456 | 0 | 0 | 966 | |
| SQA037386 | 3A (P3-A) | 4457 | 4687 | 0 | 0 | 231 | |
| SQA037387 | 3B (VPg) | 4688 | 4750 | 0 | 0 | 63 | |
| SQA037388 | protease 3C | 4751 | 5299 | 0 | 0 | 549 | |
| SQA037389 | 3D | 5300 | 6518 | 0 | 1 | 1219 | |
| SQA037390 | CDS | 215 | 6518 | 0 | 1 | 6304 | |
| SQA037391 | VP4/2 | 215 | 649 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA005116 | protease 3C | 1513 | 1695 | 0 | 0 | 183 | |
| SPA005117 | 3D | 1696 | 2101 | 0 | 1 | 406 | |
| SPA005118 | 3B (VPg) | 1492 | 1512 | 0 | 0 | 21 | |
| SPA005119 | 3A (P3-A) | 1415 | 1491 | 0 | 0 | 77 | |
| SPA005120 | 2C (P2-C) | 1093 | 1414 | 0 | 0 | 322 | |
| SPA005121 | 2B (P2-B) | 998 | 1092 | 0 | 0 | 95 | |
| SPA005122 | 2A (P2-A) | 856 | 997 | 0 | 0 | 142 | |
| SPA005123 | 1D (VP1) | 570 | 855 | 0 | 0 | 286 | |
| SPA005124 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA005125 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA005126 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA005127 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA005128 | CDS | 1 | 2101 | 0 | 0 | 2101 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675855 | Genome sequences of rhinovirus a isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |