| RVdb StrainID | ANZ00006 | GenBank Accession | ON989184.1 |
| Species | RVA | Sequence Length | 5204 nt |
| Serotype | 67 Checked by RVdb | Serotype (GenBank) | 67 |
| Definition | Rhinovirus A strain RV-A67-USA-Nov-2020-Tempe-AZ polyprotein gene, partial cds | GenBank Submission Date | 2022-10-08 |
| Strain Name | RV-A67-USA-Nov-2020-Tempe-AZ | Sampling Date | 2020 |
| Sampling Country | USA | Sampling location | a university clinic in the Southwest United States |
| Isolation Source | influenza-like Illness | NCBI Taxon ID | 147711 |
| Sequencing Technology | Illumina | Assembly Method | MEGAHIT v. 1.2.9. |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA031258 | 1A (VP4) | 90 | 296 | 0 | 0 | 207 | |
| SQA031259 | 1B (VP2) | 297 | 1082 | 0 | 0 | 786 | |
| SQA031260 | 1C (VP3) | 1083 | 1796 | 0 | 0 | 714 | |
| SQA031261 | 1D (VP1) | 1797 | 2663 | 0 | 0 | 867 | |
| SQA031262 | 2A (P2-A) | 2664 | 3089 | 0 | 0 | 426 | |
| SQA031263 | 2B (P2-B) | 3090 | 3374 | 0 | 0 | 285 | |
| SQA031264 | 2C (P2-C) | 3375 | 4340 | 0 | 0 | 966 | |
| SQA031265 | 3A (P3-A) | 4341 | 4571 | 0 | 0 | 231 | |
| SQA031266 | 3B (VPg) | 4572 | 4634 | 0 | 0 | 63 | |
| SQA031267 | protease 3C | 4635 | 5183 | 0 | 0 | 549 | |
| SQA031268 | CDS | 90 | 5204 | 0 | 1 | 5115 | |
| SQA031269 | VP4/2 | 90 | 524 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA031926 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA031927 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA031928 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA031929 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA031930 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA031931 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA031932 | 1D (VP1) | 570 | 858 | 0 | 0 | 289 | |
| SPA031933 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA031934 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA031935 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA031936 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA031937 | CDS | 1 | 1705 | 0 | 0 | 1705 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 36168937 | Surveillance of rhinovirus diversity among a university community identifies multiple types from all three species including an unassigned rhinovirus A genotype. | 2022 | Influenza Other Respir Viruses | View More |