| RVdb StrainID | ANS07938 | GenBank Accession | FJ445140.1 |
| Species | RVA | Sequence Length | 7136 nt |
| Serotype | 56 Checked by RVdb | Serotype (GenBank) | 56 |
| Definition | Human rhinovirus 56 strain ATCC VR-1166, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1166 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185916 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA030413 | 1A (VP4) | 614 | 820 | 0 | 0 | 207 | |
| SQA030414 | 1B (VP2) | 821 | 1615 | 0 | 0 | 795 | |
| SQA030415 | 1C (VP3) | 1616 | 2329 | 0 | 0 | 714 | |
| SQA030416 | 1D (VP1) | 2330 | 3187 | 0 | 0 | 858 | |
| SQA030417 | 2A (P2-A) | 3188 | 3613 | 0 | 0 | 426 | |
| SQA030418 | 2B (P2-B) | 3614 | 3898 | 0 | 0 | 285 | |
| SQA030419 | 2C (P2-C) | 3899 | 4864 | 0 | 0 | 966 | |
| SQA030420 | 3'UTR | 7091 | 7136 | 0 | 0 | 46 | |
| SQA030421 | 3A (P3-A) | 4865 | 5095 | 0 | 0 | 231 | |
| SQA030422 | 3B (VPg) | 5096 | 5158 | 0 | 0 | 63 | |
| SQA030423 | protease 3C | 5159 | 5707 | 0 | 0 | 549 | |
| SQA030424 | 3D | 5708 | 7087 | 0 | 0 | 1380 | |
| SQA030425 | 5'UTR | 1 | 613 | 0 | 0 | 613 | |
| SQA030426 | CDS | 614 | 7090 | 0 | 0 | 6477 | |
| SQA030427 | VP4/2 | 614 | 1048 | 0 | 0 | 435 | |
| SQA030428 | genome | 1 | 7136 | 0 | 0 | 7136 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001438 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA001439 | 3D | 1699 | 2158 | 0 | 0 | 460 | |
| SPA001440 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA001441 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA001442 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA001443 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA001444 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA001445 | 1D (VP1) | 573 | 858 | 0 | 0 | 286 | |
| SPA001446 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA001447 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA001448 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001449 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001450 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |