| RVdb StrainID | ANS07933 | GenBank Accession | FJ445145.1 |
| Species | RVA | Sequence Length | 7131 nt |
| Serotype | 62 Checked by RVdb | Serotype (GenBank) | 62 |
| Definition | Human rhinovirus 62 strain ATCC VR-1172, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1172 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 44134 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA030397 | 1A (VP4) | 615 | 821 | 0 | 0 | 207 | |
| SQA030398 | 1B (VP2) | 822 | 1622 | 0 | 0 | 801 | |
| SQA030399 | 1C (VP3) | 1623 | 2336 | 0 | 0 | 714 | |
| SQA030400 | 1D (VP1) | 2337 | 3182 | 0 | 0 | 846 | |
| SQA030401 | 2A (P2-A) | 3183 | 3608 | 0 | 0 | 426 | |
| SQA030402 | 2B (P2-B) | 3609 | 3893 | 0 | 0 | 285 | |
| SQA030403 | 2C (P2-C) | 3894 | 4859 | 0 | 0 | 966 | |
| SQA030404 | 3'UTR | 7086 | 7131 | 0 | 0 | 46 | |
| SQA030405 | 3A (P3-A) | 4860 | 5090 | 0 | 0 | 231 | |
| SQA030406 | 3B (VPg) | 5091 | 5153 | 0 | 0 | 63 | |
| SQA030407 | protease 3C | 5154 | 5702 | 0 | 0 | 549 | |
| SQA030408 | 3D | 5703 | 7082 | 0 | 0 | 1380 | |
| SQA030409 | 5'UTR | 1 | 614 | 0 | 0 | 614 | |
| SQA030410 | CDS | 615 | 7085 | 0 | 0 | 6471 | |
| SQA030411 | VP4/2 | 615 | 1049 | 0 | 0 | 435 | |
| SQA030412 | genome | 1 | 7131 | 0 | 0 | 7131 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001503 | protease 3C | 1514 | 1696 | 0 | 0 | 183 | |
| SPA001504 | 3D | 1697 | 2156 | 0 | 0 | 460 | |
| SPA001505 | 3B (VPg) | 1493 | 1513 | 0 | 0 | 21 | |
| SPA001506 | 3A (P3-A) | 1416 | 1492 | 0 | 0 | 77 | |
| SPA001507 | 2C (P2-C) | 1094 | 1415 | 0 | 0 | 322 | |
| SPA001508 | 2B (P2-B) | 999 | 1093 | 0 | 0 | 95 | |
| SPA001509 | 2A (P2-A) | 857 | 998 | 0 | 0 | 142 | |
| SPA001510 | 1D (VP1) | 575 | 856 | 0 | 0 | 282 | |
| SPA001511 | 1C (VP3) | 337 | 574 | 0 | 0 | 238 | |
| SPA001512 | 1B (VP2) | 70 | 336 | 0 | 0 | 267 | |
| SPA001513 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001514 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001515 | CDS | 1 | 2156 | 0 | 0 | 2156 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |