| RVdb StrainID | ANS07923 | GenBank Accession | FJ445158.1 |
| Species | RVA | Sequence Length | 7116 nt |
| Serotype | 81 Checked by RVdb | Serotype (GenBank) | 81 |
| Definition | Human rhinovirus 81 isolate F06, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | F06 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185935 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA030365 | 1A (VP4) | 618 | 824 | 0 | 0 | 207 | |
| SQA030366 | 1B (VP2) | 825 | 1607 | 0 | 0 | 783 | |
| SQA030367 | 1C (VP3) | 1608 | 2321 | 0 | 0 | 714 | |
| SQA030368 | 1D (VP1) | 2322 | 3176 | 0 | 0 | 855 | |
| SQA030369 | 2A (P2-A) | 3177 | 3602 | 0 | 0 | 426 | |
| SQA030370 | 2B (P2-B) | 3603 | 3887 | 0 | 0 | 285 | |
| SQA030371 | 2C (P2-C) | 3888 | 4853 | 0 | 0 | 966 | |
| SQA030372 | 3'UTR | 7080 | 7116 | 0 | 0 | 37 | |
| SQA030373 | 3A (P3-A) | 4854 | 5084 | 0 | 0 | 231 | |
| SQA030374 | 3B (VPg) | 5085 | 5147 | 0 | 0 | 63 | |
| SQA030375 | protease 3C | 5148 | 5696 | 0 | 0 | 549 | |
| SQA030376 | 3D | 5697 | 7076 | 0 | 0 | 1380 | |
| SQA030377 | 5'UTR | 1 | 617 | 0 | 0 | 617 | |
| SQA030378 | CDS | 618 | 7079 | 0 | 0 | 6462 | |
| SQA030379 | VP4/2 | 618 | 1052 | 0 | 0 | 435 | |
| SQA030380 | genome | 1 | 7116 | 0 | 0 | 7116 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001633 | protease 3C | 1511 | 1693 | 0 | 0 | 183 | |
| SPA001634 | 3D | 1694 | 2153 | 0 | 0 | 460 | |
| SPA001635 | 3B (VPg) | 1490 | 1510 | 0 | 0 | 21 | |
| SPA001636 | 3A (P3-A) | 1413 | 1489 | 0 | 0 | 77 | |
| SPA001637 | 2C (P2-C) | 1091 | 1412 | 0 | 0 | 322 | |
| SPA001638 | 2B (P2-B) | 996 | 1090 | 0 | 0 | 95 | |
| SPA001639 | 2A (P2-A) | 854 | 995 | 0 | 0 | 142 | |
| SPA001640 | 1D (VP1) | 569 | 853 | 0 | 0 | 285 | |
| SPA001641 | 1C (VP3) | 331 | 568 | 0 | 0 | 238 | |
| SPA001642 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA001643 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001644 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001645 | CDS | 1 | 2153 | 0 | 0 | 2153 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |