| RVdb StrainID | ANS07913 | GenBank Accession | FJ445175.1 |
| Species | RVA | Sequence Length | 7140 nt |
| Serotype | 100 Checked by RVdb | Serotype (GenBank) | 100 |
| Definition | Human rhinovirus 100 strain ATCC VR-1300, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1300 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185946 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA030333 | 1A (VP4) | 612 | 818 | 0 | 0 | 207 | |
| SQA030334 | 1B (VP2) | 819 | 1613 | 0 | 0 | 795 | |
| SQA030335 | 1C (VP3) | 1614 | 2327 | 0 | 0 | 714 | |
| SQA030336 | 1D (VP1) | 2328 | 3191 | 0 | 0 | 864 | |
| SQA030337 | 2A (P2-A) | 3192 | 3617 | 0 | 0 | 426 | |
| SQA030338 | 2B (P2-B) | 3618 | 3902 | 0 | 0 | 285 | |
| SQA030339 | 2C (P2-C) | 3903 | 4868 | 0 | 0 | 966 | |
| SQA030340 | 3'UTR | 7095 | 7140 | 0 | 0 | 46 | |
| SQA030341 | 3A (P3-A) | 4869 | 5099 | 0 | 0 | 231 | |
| SQA030342 | 3B (VPg) | 5100 | 5162 | 0 | 0 | 63 | |
| SQA030343 | protease 3C | 5163 | 5711 | 0 | 0 | 549 | |
| SQA030344 | 3D | 5712 | 7091 | 0 | 0 | 1380 | |
| SQA030345 | 5'UTR | 1 | 611 | 0 | 0 | 611 | |
| SQA030346 | CDS | 612 | 7094 | 0 | 0 | 6483 | |
| SQA030347 | VP4/2 | 612 | 1046 | 0 | 0 | 435 | |
| SQA030348 | genome | 1 | 7140 | 0 | 0 | 7140 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001763 | protease 3C | 1518 | 1700 | 0 | 0 | 183 | |
| SPA001764 | 3D | 1701 | 2160 | 0 | 0 | 460 | |
| SPA001765 | 3B (VPg) | 1497 | 1517 | 0 | 0 | 21 | |
| SPA001766 | 3A (P3-A) | 1420 | 1496 | 0 | 0 | 77 | |
| SPA001767 | 2C (P2-C) | 1098 | 1419 | 0 | 0 | 322 | |
| SPA001768 | 2B (P2-B) | 1003 | 1097 | 0 | 0 | 95 | |
| SPA001769 | 2A (P2-A) | 861 | 1002 | 0 | 0 | 142 | |
| SPA001770 | 1D (VP1) | 573 | 860 | 0 | 0 | 288 | |
| SPA001771 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA001772 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA001773 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001774 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001775 | CDS | 1 | 2160 | 0 | 0 | 2160 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |