| RVdb StrainID | ANS07908 | GenBank Accession | FJ445180.1 |
| Species | RVA | Sequence Length | 7136 nt |
| Serotype | 38 Checked by RVdb | Serotype (GenBank) | 38 |
| Definition | Human rhinovirus 38 strain ATCC VR-1148, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1148 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185906 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA030317 | 1A (VP4) | 611 | 817 | 0 | 0 | 207 | |
| SQA030318 | 1B (VP2) | 818 | 1603 | 0 | 0 | 786 | |
| SQA030319 | 1C (VP3) | 1604 | 2317 | 0 | 0 | 714 | |
| SQA030320 | 1D (VP1) | 2318 | 3187 | 0 | 0 | 870 | |
| SQA030321 | 2A (P2-A) | 3188 | 3613 | 0 | 0 | 426 | |
| SQA030322 | 2B (P2-B) | 3614 | 3898 | 0 | 0 | 285 | |
| SQA030323 | 2C (P2-C) | 3899 | 4864 | 0 | 0 | 966 | |
| SQA030324 | 3'UTR | 7091 | 7136 | 0 | 0 | 46 | |
| SQA030325 | 3A (P3-A) | 4865 | 5095 | 0 | 0 | 231 | |
| SQA030326 | 3B (VPg) | 5096 | 5158 | 0 | 0 | 63 | |
| SQA030327 | protease 3C | 5159 | 5707 | 0 | 0 | 549 | |
| SQA030328 | 3D | 5708 | 7087 | 0 | 0 | 1380 | |
| SQA030329 | 5'UTR | 1 | 610 | 0 | 0 | 610 | |
| SQA030330 | CDS | 611 | 7090 | 0 | 0 | 6480 | |
| SQA030331 | VP4/2 | 611 | 1045 | 0 | 0 | 435 | |
| SQA030332 | genome | 1 | 7136 | 0 | 0 | 7136 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001828 | protease 3C | 1517 | 1699 | 0 | 0 | 183 | |
| SPA001829 | 3D | 1700 | 2159 | 0 | 0 | 460 | |
| SPA001830 | 3B (VPg) | 1496 | 1516 | 0 | 0 | 21 | |
| SPA001831 | 3A (P3-A) | 1419 | 1495 | 0 | 0 | 77 | |
| SPA001832 | 2C (P2-C) | 1097 | 1418 | 0 | 0 | 322 | |
| SPA001833 | 2B (P2-B) | 1002 | 1096 | 0 | 0 | 95 | |
| SPA001834 | 2A (P2-A) | 860 | 1001 | 0 | 0 | 142 | |
| SPA001835 | 1D (VP1) | 570 | 859 | 0 | 0 | 290 | |
| SPA001836 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA001837 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA001838 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001839 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001840 | CDS | 1 | 2159 | 0 | 0 | 2159 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |