| RVdb StrainID | ANP07962 | GenBank Accession | FJ445113.1 |
| Species | RVA | Sequence Length | 7108 nt |
| Serotype | 8 Checked by RVdb | Serotype (GenBank) | 8 |
| Definition | Human rhinovirus 8 strain ATCC VR-1118, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1118 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185890 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA022748 | 1A (VP4) | 607 | 813 | 0 | 0 | 207 | |
| SQA022749 | 1B (VP2) | 814 | 1596 | 0 | 0 | 783 | |
| SQA022750 | 1C (VP3) | 1597 | 2310 | 0 | 0 | 714 | |
| SQA022751 | 1D (VP1) | 2311 | 3162 | 0 | 0 | 852 | |
| SQA022752 | 2A (P2-A) | 3163 | 3597 | 0 | 0 | 435 | |
| SQA022753 | 2B (P2-B) | 3598 | 3882 | 0 | 0 | 285 | |
| SQA022754 | 2C (P2-C) | 3883 | 4845 | 0 | 0 | 963 | |
| SQA022755 | 3'UTR | 7072 | 7108 | 0 | 1 | 37 | |
| SQA022756 | 3A (P3-A) | 4846 | 5076 | 0 | 0 | 231 | |
| SQA022757 | 3B (VPg) | 5077 | 5139 | 0 | 0 | 63 | |
| SQA022758 | protease 3C | 5140 | 5688 | 0 | 0 | 549 | |
| SQA022759 | 3D | 5689 | 7068 | 0 | 0 | 1380 | |
| SQA022760 | 5'UTR | 1 | 606 | 0 | 0 | 606 | |
| SQA022761 | CDS | 607 | 7071 | 0 | 0 | 6465 | |
| SQA022762 | VP4/2 | 607 | 1041 | 0 | 0 | 435 | |
| SQA022763 | genome | 1 | 7108 | 0 | 1 | 7108 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001126 | protease 3C | 1512 | 1694 | 0 | 0 | 183 | |
| SPA001127 | 3D | 1695 | 2154 | 0 | 0 | 460 | |
| SPA001128 | 3B (VPg) | 1491 | 1511 | 0 | 0 | 21 | |
| SPA001129 | 3A (P3-A) | 1414 | 1490 | 0 | 0 | 77 | |
| SPA001130 | 2C (P2-C) | 1093 | 1413 | 0 | 0 | 321 | |
| SPA001131 | 2B (P2-B) | 998 | 1092 | 0 | 0 | 95 | |
| SPA001132 | 2A (P2-A) | 853 | 997 | 0 | 0 | 145 | |
| SPA001133 | 1D (VP1) | 569 | 852 | 0 | 0 | 284 | |
| SPA001134 | 1C (VP3) | 331 | 568 | 0 | 0 | 238 | |
| SPA001135 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA001136 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001137 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001138 | CDS | 1 | 2154 | 0 | 0 | 2154 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |