| RVdb StrainID | ANP07957 | GenBank Accession | FJ445118.1 |
| Species | RVA | Sequence Length | 7119 nt |
| Serotype | 18 Checked by RVdb | Serotype (GenBank) | 18 |
| Definition | Human rhinovirus 18 strain ATCC VR-1128, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1128 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147674 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA022732 | 1A (VP4) | 612 | 818 | 0 | 0 | 207 | |
| SQA022733 | 1B (VP2) | 819 | 1595 | 0 | 0 | 777 | |
| SQA022734 | 1C (VP3) | 1596 | 2309 | 0 | 0 | 714 | |
| SQA022735 | 1D (VP1) | 2310 | 3170 | 0 | 0 | 861 | |
| SQA022736 | 2A (P2-A) | 3171 | 3596 | 0 | 0 | 426 | |
| SQA022737 | 2B (P2-B) | 3597 | 3881 | 0 | 0 | 285 | |
| SQA022738 | 2C (P2-C) | 3882 | 4847 | 0 | 0 | 966 | |
| SQA022739 | 3'UTR | 7074 | 7119 | 0 | 0 | 46 | |
| SQA022740 | 3A (P3-A) | 4848 | 5078 | 0 | 0 | 231 | |
| SQA022741 | 3B (VPg) | 5079 | 5141 | 0 | 0 | 63 | |
| SQA022742 | protease 3C | 5142 | 5690 | 0 | 0 | 549 | |
| SQA022743 | 3D | 5691 | 7070 | 0 | 0 | 1380 | |
| SQA022744 | 5'UTR | 1 | 611 | 0 | 0 | 611 | |
| SQA022745 | CDS | 612 | 7073 | 0 | 0 | 6462 | |
| SQA022746 | VP4/2 | 612 | 1046 | 0 | 0 | 435 | |
| SQA022747 | genome | 1 | 7119 | 0 | 0 | 7119 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001191 | protease 3C | 1511 | 1693 | 0 | 0 | 183 | |
| SPA001192 | 3D | 1694 | 2153 | 0 | 0 | 460 | |
| SPA001193 | 3B (VPg) | 1490 | 1510 | 0 | 0 | 21 | |
| SPA001194 | 3A (P3-A) | 1413 | 1489 | 0 | 0 | 77 | |
| SPA001195 | 2C (P2-C) | 1091 | 1412 | 0 | 0 | 322 | |
| SPA001196 | 2B (P2-B) | 996 | 1090 | 0 | 0 | 95 | |
| SPA001197 | 2A (P2-A) | 854 | 995 | 0 | 0 | 142 | |
| SPA001198 | 1D (VP1) | 567 | 853 | 0 | 0 | 287 | |
| SPA001199 | 1C (VP3) | 329 | 566 | 0 | 0 | 238 | |
| SPA001200 | 1B (VP2) | 70 | 328 | 0 | 0 | 259 | |
| SPA001201 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001202 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001203 | CDS | 1 | 2153 | 0 | 0 | 2153 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |