| RVdb StrainID | ANP07917 | GenBank Accession | FJ445167.1 |
| Species | RVA | Sequence Length | 7124 nt |
| Serotype | 90 Checked by RVdb | Serotype (GenBank) | 90 |
| Definition | Human rhinovirus 90 strain ATCC VR-1291, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1291 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185940 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA022604 | 1A (VP4) | 617 | 823 | 0 | 0 | 207 | |
| SQA022605 | 1B (VP2) | 824 | 1606 | 0 | 0 | 783 | |
| SQA022606 | 1C (VP3) | 1607 | 2320 | 0 | 0 | 714 | |
| SQA022607 | 1D (VP1) | 2321 | 3175 | 0 | 0 | 855 | |
| SQA022608 | 2A (P2-A) | 3176 | 3601 | 0 | 0 | 426 | |
| SQA022609 | 2B (P2-B) | 3602 | 3886 | 0 | 0 | 285 | |
| SQA022610 | 2C (P2-C) | 3887 | 4852 | 0 | 0 | 966 | |
| SQA022611 | 3'UTR | 7079 | 7124 | 0 | 0 | 46 | |
| SQA022612 | 3A (P3-A) | 4853 | 5083 | 0 | 0 | 231 | |
| SQA022613 | 3B (VPg) | 5084 | 5146 | 0 | 0 | 63 | |
| SQA022614 | protease 3C | 5147 | 5695 | 0 | 0 | 549 | |
| SQA022615 | 3D | 5696 | 7075 | 0 | 0 | 1380 | |
| SQA022616 | 5'UTR | 1 | 616 | 0 | 0 | 616 | |
| SQA022617 | CDS | 617 | 7078 | 0 | 0 | 6462 | |
| SQA022618 | VP4/2 | 617 | 1051 | 0 | 0 | 435 | |
| SQA022619 | genome | 1 | 7124 | 0 | 0 | 7124 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001711 | protease 3C | 1511 | 1693 | 0 | 0 | 183 | |
| SPA001712 | 3D | 1694 | 2153 | 0 | 0 | 460 | |
| SPA001713 | 3B (VPg) | 1490 | 1510 | 0 | 0 | 21 | |
| SPA001714 | 3A (P3-A) | 1413 | 1489 | 0 | 0 | 77 | |
| SPA001715 | 2C (P2-C) | 1091 | 1412 | 0 | 0 | 322 | |
| SPA001716 | 2B (P2-B) | 996 | 1090 | 0 | 0 | 95 | |
| SPA001717 | 2A (P2-A) | 854 | 995 | 0 | 0 | 142 | |
| SPA001718 | 1D (VP1) | 569 | 853 | 0 | 0 | 285 | |
| SPA001719 | 1C (VP3) | 331 | 568 | 0 | 0 | 238 | |
| SPA001720 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA001721 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001722 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001723 | CDS | 1 | 2153 | 0 | 0 | 2153 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |