| RVdb StrainID | ANP07912 | GenBank Accession | FJ445176.1 |
| Species | RVA | Sequence Length | 7146 nt |
| Serotype | 7 Checked by RVdb | Serotype (GenBank) | 7 |
| Definition | Human rhinovirus 7 strain ATCC VR-1117, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1117 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 44136 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA022588 | 1A (VP4) | 619 | 825 | 0 | 0 | 207 | |
| SQA022589 | 1B (VP2) | 826 | 1620 | 0 | 0 | 795 | |
| SQA022590 | 1C (VP3) | 1621 | 2337 | 0 | 0 | 717 | |
| SQA022591 | 1D (VP1) | 2338 | 3210 | 0 | 0 | 873 | |
| SQA022592 | 2A (P2-A) | 3211 | 3636 | 0 | 0 | 426 | |
| SQA022593 | 2B (P2-B) | 3637 | 3921 | 0 | 0 | 285 | |
| SQA022594 | 2C (P2-C) | 3922 | 4884 | 0 | 0 | 963 | |
| SQA022595 | 3'UTR | 7108 | 7146 | 0 | 0 | 39 | |
| SQA022596 | 3A (P3-A) | 4885 | 5112 | 0 | 0 | 228 | |
| SQA022597 | 3B (VPg) | 5113 | 5175 | 0 | 0 | 63 | |
| SQA022598 | protease 3C | 5176 | 5724 | 0 | 0 | 549 | |
| SQA022599 | 3D | 5725 | 7104 | 0 | 0 | 1380 | |
| SQA022600 | 5'UTR | 1 | 618 | 0 | 0 | 618 | |
| SQA022601 | CDS | 619 | 7107 | 0 | 0 | 6489 | |
| SQA022602 | VP4/2 | 619 | 1053 | 0 | 0 | 435 | |
| SQA022603 | genome | 1 | 7146 | 0 | 0 | 7146 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001776 | protease 3C | 1520 | 1702 | 0 | 0 | 183 | |
| SPA001777 | 3D | 1703 | 2162 | 0 | 0 | 460 | |
| SPA001778 | 3B (VPg) | 1499 | 1519 | 0 | 0 | 21 | |
| SPA001779 | 3A (P3-A) | 1423 | 1498 | 0 | 0 | 76 | |
| SPA001780 | 2C (P2-C) | 1102 | 1422 | 0 | 0 | 321 | |
| SPA001781 | 2B (P2-B) | 1007 | 1101 | 0 | 0 | 95 | |
| SPA001782 | 2A (P2-A) | 865 | 1006 | 0 | 0 | 142 | |
| SPA001783 | 1D (VP1) | 574 | 864 | 0 | 0 | 291 | |
| SPA001784 | 1C (VP3) | 335 | 573 | 0 | 0 | 239 | |
| SPA001785 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA001786 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001787 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001788 | CDS | 1 | 2162 | 0 | 0 | 2162 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |