| RVdb StrainID | ANP07152 | GenBank Accession | JN815238.1 |
| Species | RVA | Sequence Length | 6584 nt |
| Serotype | 76 Checked by RVdb | Serotype (GenBank) | 76 |
| Definition | Human rhinovirus A strain HRV-A76_p1146_sR3288_2010 polyprotein gene, partial cds | GenBank Submission Date | 2017-01-25 |
| Strain Name | HRV-A76_p1146_sR3288_2010 | Sampling Date | 2010-04-24 |
| Sampling Country | USA | Sampling location | Madison, WI |
| Isolation Source | oronasal secretion [ENVO:02000035] | NCBI Taxon ID | 147711 |
| Sequencing Technology | Illumina | Assembly Method | Velvet 1.1.04 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA022057 | 1A (VP4) | 319 | 525 | 0 | 0 | 207 | |
| SQA022058 | 1B (VP2) | 526 | 1314 | 0 | 0 | 789 | |
| SQA022059 | 1C (VP3) | 1315 | 2028 | 0 | 0 | 714 | |
| SQA022060 | 1D (VP1) | 2029 | 2889 | 0 | 0 | 861 | |
| SQA022061 | 2A (P2-A) | 2890 | 3315 | 0 | 0 | 426 | |
| SQA022062 | 2B (P2-B) | 3316 | 3600 | 0 | 0 | 285 | |
| SQA022063 | 2C (P2-C) | 3601 | 4569 | 0 | 0 | 969 | |
| SQA022064 | 3A (P3-A) | 4570 | 4800 | 0 | 0 | 231 | |
| SQA022065 | 3B (VPg) | 4801 | 4863 | 0 | 0 | 63 | |
| SQA022066 | protease 3C | 4864 | 5412 | 0 | 0 | 549 | |
| SQA022067 | 3D | 5413 | 6584 | 0 | 1 | 1172 | |
| SQA022068 | 5'UTR | 1 | 318 | 1 | 0 | 318 | |
| SQA022069 | CDS | 319 | 6584 | 0 | 1 | 6266 | |
| SQA022070 | VP4/2 | 319 | 753 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA003991 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA003992 | 3D | 1699 | 2089 | 0 | 1 | 391 | |
| SPA003993 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA003994 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA003995 | 2C (P2-C) | 1095 | 1417 | 0 | 0 | 323 | |
| SPA003996 | 2B (P2-B) | 1000 | 1094 | 0 | 0 | 95 | |
| SPA003997 | 2A (P2-A) | 858 | 999 | 0 | 0 | 142 | |
| SPA003998 | 1D (VP1) | 571 | 857 | 0 | 0 | 287 | |
| SPA003999 | 1C (VP3) | 333 | 570 | 0 | 0 | 238 | |
| SPA004000 | 1B (VP2) | 70 | 332 | 0 | 0 | 263 | |
| SPA004001 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA004002 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA004003 | CDS | 1 | 2089 | 0 | 0 | 2089 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24675855 | Genome sequences of rhinovirus a isolates from wisconsin pediatric respiratory studies. | 2014 | Genome Announc | View More |