| RVdb StrainID | ANM07960 | GenBank Accession | FJ445115.1 |
| Species | RVA | Sequence Length | 7133 nt |
| Serotype | 9 Checked by RVdb | Serotype (GenBank) | 9 |
| Definition | Human rhinovirus 9 isolate F02, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | F02 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185891 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA014920 | 1A (VP4) | 613 | 819 | 0 | 0 | 207 | |
| SQA014921 | 1B (VP2) | 820 | 1605 | 0 | 0 | 786 | |
| SQA014922 | 1C (VP3) | 1606 | 2319 | 0 | 0 | 714 | |
| SQA014923 | 1D (VP1) | 2320 | 3186 | 0 | 0 | 867 | |
| SQA014924 | 2A (P2-A) | 3187 | 3612 | 0 | 0 | 426 | |
| SQA014925 | 2B (P2-B) | 3613 | 3897 | 0 | 0 | 285 | |
| SQA014926 | 2C (P2-C) | 3898 | 4863 | 0 | 0 | 966 | |
| SQA014927 | 3'UTR | 7090 | 7133 | 0 | 0 | 44 | |
| SQA014928 | 3A (P3-A) | 4864 | 5094 | 0 | 0 | 231 | |
| SQA014929 | 3B (VPg) | 5095 | 5157 | 0 | 0 | 63 | |
| SQA014930 | protease 3C | 5158 | 5706 | 0 | 0 | 549 | |
| SQA014931 | 3D | 5707 | 7086 | 0 | 0 | 1380 | |
| SQA014932 | 5'UTR | 1 | 612 | 0 | 0 | 612 | |
| SQA014933 | CDS | 613 | 7089 | 0 | 0 | 6477 | |
| SQA014934 | VP4/2 | 613 | 1047 | 0 | 0 | 435 | |
| SQA014935 | genome | 1 | 7133 | 0 | 0 | 7133 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001152 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA001153 | 3D | 1699 | 2158 | 0 | 0 | 460 | |
| SPA001154 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA001155 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA001156 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA001157 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA001158 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA001159 | 1D (VP1) | 570 | 858 | 0 | 0 | 289 | |
| SPA001160 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA001161 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA001162 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001163 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001164 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |