| RVdb StrainID | ANM07955 | GenBank Accession | FJ445120.1 |
| Species | RVA | Sequence Length | 7163 nt |
| Serotype | 20 Checked by RVdb | Serotype (GenBank) | 20 |
| Definition | Human rhinovirus 20 strain ATCC VR-1130, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1130 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147675 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA014904 | 1A (VP4) | 622 | 828 | 0 | 0 | 207 | |
| SQA014905 | 1B (VP2) | 829 | 1614 | 0 | 0 | 786 | |
| SQA014906 | 1C (VP3) | 1615 | 2328 | 0 | 0 | 714 | |
| SQA014907 | 1D (VP1) | 2329 | 3219 | 0 | 0 | 891 | |
| SQA014908 | 2A (P2-A) | 3220 | 3648 | 0 | 0 | 429 | |
| SQA014909 | 2B (P2-B) | 3649 | 3933 | 0 | 0 | 285 | |
| SQA014910 | 2C (P2-C) | 3934 | 4896 | 0 | 0 | 963 | |
| SQA014911 | 3'UTR | 7123 | 7163 | 0 | 0 | 41 | |
| SQA014912 | 3A (P3-A) | 4897 | 5130 | 0 | 0 | 234 | |
| SQA014913 | 3B (VPg) | 5131 | 5193 | 0 | 0 | 63 | |
| SQA014914 | protease 3C | 5194 | 5742 | 0 | 0 | 549 | |
| SQA014915 | 3D | 5743 | 7119 | 0 | 0 | 1377 | |
| SQA014916 | 5'UTR | 1 | 621 | 0 | 0 | 621 | |
| SQA014917 | CDS | 622 | 7122 | 0 | 0 | 6501 | |
| SQA014918 | VP4/2 | 622 | 1056 | 0 | 0 | 435 | |
| SQA014919 | genome | 1 | 7163 | 0 | 0 | 7163 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001217 | protease 3C | 1525 | 1707 | 0 | 0 | 183 | |
| SPA001218 | 3D | 1708 | 2166 | 0 | 0 | 459 | |
| SPA001219 | 3B (VPg) | 1504 | 1524 | 0 | 0 | 21 | |
| SPA001220 | 3A (P3-A) | 1426 | 1503 | 0 | 0 | 78 | |
| SPA001221 | 2C (P2-C) | 1105 | 1425 | 0 | 0 | 321 | |
| SPA001222 | 2B (P2-B) | 1010 | 1104 | 0 | 0 | 95 | |
| SPA001223 | 2A (P2-A) | 867 | 1009 | 0 | 0 | 143 | |
| SPA001224 | 1D (VP1) | 570 | 866 | 0 | 0 | 297 | |
| SPA001225 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA001226 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA001227 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001228 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001229 | CDS | 1 | 2166 | 0 | 0 | 2166 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |