| RVdb StrainID | ANM07950 | GenBank Accession | FJ445126.1 |
| Species | RVA | Sequence Length | 7131 nt |
| Serotype | 31 Checked by RVdb | Serotype (GenBank) | 31 |
| Definition | Human rhinovirus 31 strain ATCC VR-506, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-506 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185902 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA014888 | 1A (VP4) | 612 | 818 | 0 | 0 | 207 | |
| SQA014889 | 1B (VP2) | 819 | 1613 | 0 | 0 | 795 | |
| SQA014890 | 1C (VP3) | 1614 | 2327 | 0 | 0 | 714 | |
| SQA014891 | 1D (VP1) | 2328 | 3182 | 0 | 0 | 855 | |
| SQA014892 | 2A (P2-A) | 3183 | 3608 | 0 | 0 | 426 | |
| SQA014893 | 2B (P2-B) | 3609 | 3893 | 0 | 0 | 285 | |
| SQA014894 | 2C (P2-C) | 3894 | 4859 | 0 | 0 | 966 | |
| SQA014895 | 3'UTR | 7086 | 7131 | 0 | 0 | 46 | |
| SQA014896 | 3A (P3-A) | 4860 | 5090 | 0 | 0 | 231 | |
| SQA014897 | 3B (VPg) | 5091 | 5153 | 0 | 0 | 63 | |
| SQA014898 | protease 3C | 5154 | 5702 | 0 | 0 | 549 | |
| SQA014899 | 3D | 5703 | 7082 | 0 | 0 | 1380 | |
| SQA014900 | 5'UTR | 1 | 611 | 0 | 0 | 611 | |
| SQA014901 | CDS | 612 | 7085 | 0 | 0 | 6474 | |
| SQA014902 | VP4/2 | 612 | 1046 | 0 | 0 | 435 | |
| SQA014903 | genome | 1 | 7131 | 0 | 0 | 7131 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001282 | protease 3C | 1515 | 1697 | 0 | 0 | 183 | |
| SPA001283 | 3D | 1698 | 2157 | 0 | 0 | 460 | |
| SPA001284 | 3B (VPg) | 1494 | 1514 | 0 | 0 | 21 | |
| SPA001285 | 3A (P3-A) | 1417 | 1493 | 0 | 0 | 77 | |
| SPA001286 | 2C (P2-C) | 1095 | 1416 | 0 | 0 | 322 | |
| SPA001287 | 2B (P2-B) | 1000 | 1094 | 0 | 0 | 95 | |
| SPA001288 | 2A (P2-A) | 858 | 999 | 0 | 0 | 142 | |
| SPA001289 | 1D (VP1) | 573 | 857 | 0 | 0 | 285 | |
| SPA001290 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA001291 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA001292 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001293 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001294 | CDS | 1 | 2157 | 0 | 0 | 2157 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |