| RVdb StrainID | ANM07945 | GenBank Accession | FJ445132.1 |
| Species | RVA | Sequence Length | 7114 nt |
| Serotype | 45 Checked by RVdb | Serotype (GenBank) | 45 |
| Definition | Human rhinovirus 45 strain ATCC VR-1155, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1155 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147676 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA014872 | 1A (VP4) | 616 | 822 | 0 | 0 | 207 | |
| SQA014873 | 1B (VP2) | 823 | 1602 | 0 | 0 | 780 | |
| SQA014874 | 1C (VP3) | 1603 | 2316 | 0 | 0 | 714 | |
| SQA014875 | 1D (VP1) | 2317 | 3165 | 0 | 0 | 849 | |
| SQA014876 | 2A (P2-A) | 3166 | 3600 | 0 | 0 | 435 | |
| SQA014877 | 2B (P2-B) | 3601 | 3885 | 0 | 0 | 285 | |
| SQA014878 | 2C (P2-C) | 3886 | 4848 | 0 | 0 | 963 | |
| SQA014879 | 3'UTR | 7075 | 7114 | 0 | 0 | 40 | |
| SQA014880 | 3A (P3-A) | 4849 | 5079 | 0 | 0 | 231 | |
| SQA014881 | 3B (VPg) | 5080 | 5142 | 0 | 0 | 63 | |
| SQA014882 | protease 3C | 5143 | 5691 | 0 | 0 | 549 | |
| SQA014883 | 3D | 5692 | 7071 | 0 | 0 | 1380 | |
| SQA014884 | 5'UTR | 1 | 615 | 0 | 0 | 615 | |
| SQA014885 | CDS | 616 | 7074 | 0 | 0 | 6459 | |
| SQA014886 | VP4/2 | 616 | 1050 | 0 | 0 | 435 | |
| SQA014887 | genome | 1 | 7114 | 0 | 0 | 7114 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001347 | protease 3C | 1510 | 1692 | 0 | 0 | 183 | |
| SPA001348 | 3D | 1693 | 2152 | 0 | 0 | 460 | |
| SPA001349 | 3B (VPg) | 1489 | 1509 | 0 | 0 | 21 | |
| SPA001350 | 3A (P3-A) | 1412 | 1488 | 0 | 0 | 77 | |
| SPA001351 | 2C (P2-C) | 1091 | 1411 | 0 | 0 | 321 | |
| SPA001352 | 2B (P2-B) | 996 | 1090 | 0 | 0 | 95 | |
| SPA001353 | 2A (P2-A) | 851 | 995 | 0 | 0 | 145 | |
| SPA001354 | 1D (VP1) | 568 | 850 | 0 | 0 | 283 | |
| SPA001355 | 1C (VP3) | 330 | 567 | 0 | 0 | 238 | |
| SPA001356 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPA001357 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001358 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001359 | CDS | 1 | 2152 | 0 | 0 | 2152 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |