| RVdb StrainID | ANM07925 | GenBank Accession | FJ445156.1 |
| Species | RVA | Sequence Length | 7138 nt |
| Serotype | 80 Checked by RVdb | Serotype (GenBank) | 80 |
| Definition | Human rhinovirus 80 strain ATCC VR-1190, complete genome | GenBank Submission Date | 2009-04-10 |
| Strain Name | ATCC VR-1190 | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185934 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA014808 | 1A (VP4) | 616 | 822 | 0 | 0 | 207 | |
| SQA014809 | 1B (VP2) | 823 | 1608 | 0 | 0 | 786 | |
| SQA014810 | 1C (VP3) | 1609 | 2322 | 0 | 0 | 714 | |
| SQA014811 | 1D (VP1) | 2323 | 3198 | 0 | 0 | 876 | |
| SQA014812 | 2A (P2-A) | 3199 | 3627 | 0 | 0 | 429 | |
| SQA014813 | 2B (P2-B) | 3628 | 3912 | 0 | 0 | 285 | |
| SQA014814 | 2C (P2-C) | 3913 | 4875 | 0 | 0 | 963 | |
| SQA014815 | 3'UTR | 7099 | 7138 | 0 | 0 | 40 | |
| SQA014816 | 3A (P3-A) | 4876 | 5106 | 0 | 0 | 231 | |
| SQA014817 | 3B (VPg) | 5107 | 5169 | 0 | 0 | 63 | |
| SQA014818 | protease 3C | 5170 | 5718 | 0 | 0 | 549 | |
| SQA014819 | 3D | 5719 | 7095 | 0 | 0 | 1377 | |
| SQA014820 | 5'UTR | 1 | 615 | 0 | 0 | 615 | |
| SQA014821 | CDS | 616 | 7098 | 0 | 0 | 6483 | |
| SQA014822 | VP4/2 | 616 | 1050 | 0 | 0 | 435 | |
| SQA014823 | genome | 1 | 7138 | 0 | 0 | 7138 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA001607 | protease 3C | 1519 | 1701 | 0 | 0 | 183 | |
| SPA001608 | 3D | 1702 | 2160 | 0 | 0 | 459 | |
| SPA001609 | 3B (VPg) | 1498 | 1518 | 0 | 0 | 21 | |
| SPA001610 | 3A (P3-A) | 1421 | 1497 | 0 | 0 | 77 | |
| SPA001611 | 2C (P2-C) | 1100 | 1420 | 0 | 0 | 321 | |
| SPA001612 | 2B (P2-B) | 1005 | 1099 | 0 | 0 | 95 | |
| SPA001613 | 2A (P2-A) | 862 | 1004 | 0 | 0 | 143 | |
| SPA001614 | 1D (VP1) | 570 | 861 | 0 | 0 | 292 | |
| SPA001615 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA001616 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA001617 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA001618 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA001619 | CDS | 1 | 2160 | 0 | 0 | 2160 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19213880 | Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. | 2009 | Science | View More |